Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4375

Experiment: Cisplatin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4373 and Ac3H11_4374 are separated by 415 nucleotidesAc3H11_4374 and Ac3H11_4375 overlap by 4 nucleotidesAc3H11_4375 and Ac3H11_4376 overlap by 4 nucleotides Ac3H11_4373 - conserved hypothetical protein, at 162,345 to 162,821 _4373 Ac3H11_4374 - hypothetical protein, at 163,237 to 163,473 _4374 Ac3H11_4375 - Cellulose synthase, putative, at 163,470 to 164,252 _4375 Ac3H11_4376 - Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12), at 164,249 to 166,444 _4376 Position (kb) 163 164 165Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 162.721 kb on - strand, within Ac3H11_4373at 162.854 kb on - strandat 162.928 kb on + strandat 162.986 kb on + strandat 162.986 kb on + strandat 162.986 kb on + strandat 162.986 kb on + strandat 162.986 kb on + strandat 162.987 kb on - strandat 162.987 kb on - strandat 162.987 kb on - strandat 162.987 kb on - strandat 163.247 kb on + strandat 163.247 kb on + strandat 163.247 kb on + strandat 163.670 kb on + strand, within Ac3H11_4375at 163.670 kb on + strand, within Ac3H11_4375at 163.671 kb on - strand, within Ac3H11_4375at 163.722 kb on + strand, within Ac3H11_4375at 163.722 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.804 kb on + strand, within Ac3H11_4375at 163.805 kb on - strand, within Ac3H11_4375at 163.805 kb on - strand, within Ac3H11_4375at 163.867 kb on - strand, within Ac3H11_4375at 163.867 kb on - strand, within Ac3H11_4375at 163.932 kb on + strand, within Ac3H11_4375at 163.932 kb on + strand, within Ac3H11_4375at 163.932 kb on + strand, within Ac3H11_4375at 163.933 kb on - strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.967 kb on + strand, within Ac3H11_4375at 163.968 kb on - strand, within Ac3H11_4375at 163.968 kb on - strand, within Ac3H11_4375at 163.968 kb on - strand, within Ac3H11_4375at 163.968 kb on - strand, within Ac3H11_4375at 163.971 kb on + strand, within Ac3H11_4375at 163.971 kb on + strand, within Ac3H11_4375at 163.971 kb on + strand, within Ac3H11_4375at 163.971 kb on + strand, within Ac3H11_4375at 163.971 kb on + strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 163.972 kb on - strand, within Ac3H11_4375at 164.137 kb on - strand, within Ac3H11_4375at 164.137 kb on - strand, within Ac3H11_4375at 164.137 kb on - strand, within Ac3H11_4375at 164.157 kb on + strand, within Ac3H11_4375at 164.559 kb on - strand, within Ac3H11_4376at 164.559 kb on - strand, within Ac3H11_4376at 164.559 kb on - strand, within Ac3H11_4376at 164.559 kb on - strand, within Ac3H11_4376at 164.564 kb on + strand, within Ac3H11_4376at 164.564 kb on + strand, within Ac3H11_4376at 164.564 kb on + strand, within Ac3H11_4376at 164.564 kb on + strand, within Ac3H11_4376at 164.645 kb on + strand, within Ac3H11_4376at 164.645 kb on + strand, within Ac3H11_4376at 164.645 kb on + strand, within Ac3H11_4376at 164.645 kb on + strand, within Ac3H11_4376at 164.646 kb on - strand, within Ac3H11_4376at 164.646 kb on - strand, within Ac3H11_4376at 164.646 kb on - strand, within Ac3H11_4376at 164.673 kb on - strand, within Ac3H11_4376at 164.765 kb on + strand, within Ac3H11_4376at 164.765 kb on + strand, within Ac3H11_4376at 164.766 kb on - strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.846 kb on + strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.847 kb on - strand, within Ac3H11_4376at 164.909 kb on + strand, within Ac3H11_4376at 164.909 kb on + strand, within Ac3H11_4376at 164.910 kb on - strand, within Ac3H11_4376at 164.984 kb on + strand, within Ac3H11_4376at 164.984 kb on + strand, within Ac3H11_4376at 164.985 kb on - strand, within Ac3H11_4376at 164.985 kb on - strand, within Ac3H11_4376at 164.985 kb on - strand, within Ac3H11_4376at 165.167 kb on + strand, within Ac3H11_4376

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Per-strain Table

Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml
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162,721 - Ac3H11_4373 0.79 +1.2
162,854 - +1.4
162,928 + +1.9
162,986 + +2.1
162,986 + +2.0
162,986 + +2.2
162,986 + +1.0
162,986 + +2.3
162,987 - +2.3
162,987 - +1.8
162,987 - +2.2
162,987 - -0.3
163,247 + -0.3
163,247 + +1.7
163,247 + +2.8
163,670 + Ac3H11_4375 0.26 +1.1
163,670 + Ac3H11_4375 0.26 +2.0
163,671 - Ac3H11_4375 0.26 +0.4
163,722 + Ac3H11_4375 0.32 +2.3
163,722 + Ac3H11_4375 0.32 +2.6
163,804 + Ac3H11_4375 0.43 +1.6
163,804 + Ac3H11_4375 0.43 +1.8
163,804 + Ac3H11_4375 0.43 +2.6
163,804 + Ac3H11_4375 0.43 -0.3
163,804 + Ac3H11_4375 0.43 -0.4
163,804 + Ac3H11_4375 0.43 +1.6
163,805 - Ac3H11_4375 0.43 +2.7
163,805 - Ac3H11_4375 0.43 +0.0
163,867 - Ac3H11_4375 0.51 +1.4
163,867 - Ac3H11_4375 0.51 -2.0
163,932 + Ac3H11_4375 0.59 +2.4
163,932 + Ac3H11_4375 0.59 +0.1
163,932 + Ac3H11_4375 0.59 +1.7
163,933 - Ac3H11_4375 0.59 +3.1
163,967 + Ac3H11_4375 0.63 +0.8
163,967 + Ac3H11_4375 0.63 +2.2
163,967 + Ac3H11_4375 0.63 +1.6
163,967 + Ac3H11_4375 0.63 +1.6
163,967 + Ac3H11_4375 0.63 +1.1
163,967 + Ac3H11_4375 0.63 +1.0
163,967 + Ac3H11_4375 0.63 -1.8
163,967 + Ac3H11_4375 0.63 +2.8
163,967 + Ac3H11_4375 0.63 +1.8
163,967 + Ac3H11_4375 0.63 +1.0
163,967 + Ac3H11_4375 0.63 +2.5
163,967 + Ac3H11_4375 0.63 -2.3
163,967 + Ac3H11_4375 0.63 +0.6
163,967 + Ac3H11_4375 0.63 -4.2
163,967 + Ac3H11_4375 0.63 +1.6
163,967 + Ac3H11_4375 0.63 -0.5
163,968 - Ac3H11_4375 0.64 +1.9
163,968 - Ac3H11_4375 0.64 +1.7
163,968 - Ac3H11_4375 0.64 +3.3
163,968 - Ac3H11_4375 0.64 +0.1
163,971 + Ac3H11_4375 0.64 +1.4
163,971 + Ac3H11_4375 0.64 +1.2
163,971 + Ac3H11_4375 0.64 -0.0
163,971 + Ac3H11_4375 0.64 +0.9
163,971 + Ac3H11_4375 0.64 -0.5
163,972 - Ac3H11_4375 0.64 +0.2
163,972 - Ac3H11_4375 0.64 +2.7
163,972 - Ac3H11_4375 0.64 +0.5
163,972 - Ac3H11_4375 0.64 +3.0
163,972 - Ac3H11_4375 0.64 +1.5
163,972 - Ac3H11_4375 0.64 +1.4
163,972 - Ac3H11_4375 0.64 +1.6
164,137 - Ac3H11_4375 0.85 +0.4
164,137 - Ac3H11_4375 0.85 +2.7
164,137 - Ac3H11_4375 0.85 +1.5
164,157 + Ac3H11_4375 0.88 +0.8
164,559 - Ac3H11_4376 0.14 +1.5
164,559 - Ac3H11_4376 0.14 +2.7
164,559 - Ac3H11_4376 0.14 +1.8
164,559 - Ac3H11_4376 0.14 +1.5
164,564 + Ac3H11_4376 0.14 +1.3
164,564 + Ac3H11_4376 0.14 +1.5
164,564 + Ac3H11_4376 0.14 +2.6
164,564 + Ac3H11_4376 0.14 +2.7
164,645 + Ac3H11_4376 0.18 +0.9
164,645 + Ac3H11_4376 0.18 +2.1
164,645 + Ac3H11_4376 0.18 -1.9
164,645 + Ac3H11_4376 0.18 +2.3
164,646 - Ac3H11_4376 0.18 +0.3
164,646 - Ac3H11_4376 0.18 +2.5
164,646 - Ac3H11_4376 0.18 +2.2
164,673 - Ac3H11_4376 0.19 +3.0
164,765 + Ac3H11_4376 0.23 +1.0
164,765 + Ac3H11_4376 0.23 +2.7
164,766 - Ac3H11_4376 0.24 +0.8
164,846 + Ac3H11_4376 0.27 -1.3
164,846 + Ac3H11_4376 0.27 -3.2
164,846 + Ac3H11_4376 0.27 +3.1
164,846 + Ac3H11_4376 0.27 +0.3
164,846 + Ac3H11_4376 0.27 +2.5
164,846 + Ac3H11_4376 0.27 +2.2
164,846 + Ac3H11_4376 0.27 +1.7
164,846 + Ac3H11_4376 0.27 +1.5
164,846 + Ac3H11_4376 0.27 -0.6
164,846 + Ac3H11_4376 0.27 +0.8
164,846 + Ac3H11_4376 0.27 +2.3
164,846 + Ac3H11_4376 0.27 +2.1
164,846 + Ac3H11_4376 0.27 +3.8
164,846 + Ac3H11_4376 0.27 +1.2
164,846 + Ac3H11_4376 0.27 +2.3
164,846 + Ac3H11_4376 0.27 -0.3
164,846 + Ac3H11_4376 0.27 +1.5
164,847 - Ac3H11_4376 0.27 -2.8
164,847 - Ac3H11_4376 0.27 +2.6
164,847 - Ac3H11_4376 0.27 +0.8
164,847 - Ac3H11_4376 0.27 +2.2
164,847 - Ac3H11_4376 0.27 +1.0
164,847 - Ac3H11_4376 0.27 +3.9
164,847 - Ac3H11_4376 0.27 +2.2
164,847 - Ac3H11_4376 0.27 -0.3
164,847 - Ac3H11_4376 0.27 +2.0
164,847 - Ac3H11_4376 0.27 +3.3
164,909 + Ac3H11_4376 0.30 -0.8
164,909 + Ac3H11_4376 0.30 -1.5
164,910 - Ac3H11_4376 0.30 +2.0
164,984 + Ac3H11_4376 0.33 +3.0
164,984 + Ac3H11_4376 0.33 -0.1
164,985 - Ac3H11_4376 0.34 +2.9
164,985 - Ac3H11_4376 0.34 +1.9
164,985 - Ac3H11_4376 0.34 -0.6
165,167 + Ac3H11_4376 0.42 +0.3

Or see this region's nucleotide sequence