Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4239 and Ac3H11_4240 are separated by 76 nucleotides Ac3H11_4240 and Ac3H11_4241 are separated by 11 nucleotides Ac3H11_4241 and Ac3H11_4242 are separated by 69 nucleotides Ac3H11_4242 and Ac3H11_4243 are separated by 19 nucleotides Ac3H11_4243 and Ac3H11_4244 are separated by 30 nucleotides
Ac3H11_4239 - peptidase, M48 family, at 10,273 to 11,580
_4239
Ac3H11_4240 - hypothetical protein, at 11,657 to 11,806
_4240
Ac3H11_4241 - hypothetical protein, at 11,818 to 12,090
_4241
Ac3H11_4242 - Acylphosphate phosphohydrolase (EC 3.6.1.7), putative, at 12,160 to 12,462
_4242
Ac3H11_4243 - FIG003003: hypothetical protein, at 12,482 to 13,276
_4243
Ac3H11_4244 - sensor histidine kinase, at 13,307 to 14,629
_4244
Position (kb) 12
13 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 11.214 kb on + strand, within Ac3H11_4239 at 11.214 kb on + strand, within Ac3H11_4239 at 11.214 kb on + strand, within Ac3H11_4239 at 11.214 kb on + strand, within Ac3H11_4239 at 11.215 kb on - strand, within Ac3H11_4239 at 11.215 kb on - strand, within Ac3H11_4239 at 11.578 kb on + strand at 11.578 kb on + strand at 11.579 kb on - strand at 11.579 kb on - strand at 11.579 kb on - strand at 11.774 kb on + strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.775 kb on - strand, within Ac3H11_4240 at 11.853 kb on + strand, within Ac3H11_4241 at 11.854 kb on - strand, within Ac3H11_4241 at 12.148 kb on + strand at 12.148 kb on + strand at 12.148 kb on + strand at 12.149 kb on - strand at 12.149 kb on - strand at 12.460 kb on + strand at 12.461 kb on - strand at 12.461 kb on - strand at 12.461 kb on - strand at 12.559 kb on - strand at 12.639 kb on + strand, within Ac3H11_4243 at 12.640 kb on - strand, within Ac3H11_4243 at 12.640 kb on - strand, within Ac3H11_4243 at 12.735 kb on + strand, within Ac3H11_4243 at 12.736 kb on - strand, within Ac3H11_4243 at 12.736 kb on - strand, within Ac3H11_4243 at 12.736 kb on - strand, within Ac3H11_4243 at 13.084 kb on + strand, within Ac3H11_4243 at 13.095 kb on + strand, within Ac3H11_4243 at 13.095 kb on + strand, within Ac3H11_4243 at 13.095 kb on + strand, within Ac3H11_4243 at 13.095 kb on + strand, within Ac3H11_4243 at 13.096 kb on - strand, within Ac3H11_4243 at 13.096 kb on - strand, within Ac3H11_4243 at 13.098 kb on + strand, within Ac3H11_4243 at 13.098 kb on + strand, within Ac3H11_4243 at 13.098 kb on + strand, within Ac3H11_4243 at 13.098 kb on + strand, within Ac3H11_4243 at 13.099 kb on - strand, within Ac3H11_4243 at 13.099 kb on - strand, within Ac3H11_4243 at 13.099 kb on - strand, within Ac3H11_4243 at 13.099 kb on - strand, within Ac3H11_4243 at 13.140 kb on + strand, within Ac3H11_4243 at 13.140 kb on + strand, within Ac3H11_4243 at 13.141 kb on - strand, within Ac3H11_4243 at 13.141 kb on - strand, within Ac3H11_4243
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 11,214 + Ac3H11_4239 0.72 -2.5 11,214 + Ac3H11_4239 0.72 -3.2 11,214 + Ac3H11_4239 0.72 -2.7 11,214 + Ac3H11_4239 0.72 -1.4 11,215 - Ac3H11_4239 0.72 -0.2 11,215 - Ac3H11_4239 0.72 -0.1 11,578 + -1.1 11,578 + -0.6 11,579 - +1.5 11,579 - -0.6 11,579 - -2.3 11,774 + Ac3H11_4240 0.78 -0.1 11,775 - Ac3H11_4240 0.79 -0.6 11,775 - Ac3H11_4240 0.79 -0.4 11,775 - Ac3H11_4240 0.79 +0.3 11,775 - Ac3H11_4240 0.79 +1.2 11,775 - Ac3H11_4240 0.79 -3.0 11,775 - Ac3H11_4240 0.79 +0.1 11,853 + Ac3H11_4241 0.13 -1.5 11,854 - Ac3H11_4241 0.13 +1.7 12,148 + -2.6 12,148 + +1.8 12,148 + +1.3 12,149 - -4.1 12,149 - +1.3 12,460 + +1.5 12,461 - -2.1 12,461 - +0.6 12,461 - +3.7 12,559 - +2.2 12,639 + Ac3H11_4243 0.20 -1.9 12,640 - Ac3H11_4243 0.20 -1.6 12,640 - Ac3H11_4243 0.20 -3.0 12,735 + Ac3H11_4243 0.32 -1.5 12,736 - Ac3H11_4243 0.32 +0.6 12,736 - Ac3H11_4243 0.32 -0.7 12,736 - Ac3H11_4243 0.32 +0.0 13,084 + Ac3H11_4243 0.76 +1.7 13,095 + Ac3H11_4243 0.77 -2.4 13,095 + Ac3H11_4243 0.77 -2.1 13,095 + Ac3H11_4243 0.77 +1.3 13,095 + Ac3H11_4243 0.77 -1.0 13,096 - Ac3H11_4243 0.77 -0.9 13,096 - Ac3H11_4243 0.77 -3.4 13,098 + Ac3H11_4243 0.77 +0.1 13,098 + Ac3H11_4243 0.77 +2.0 13,098 + Ac3H11_4243 0.77 +0.9 13,098 + Ac3H11_4243 0.77 +1.7 13,099 - Ac3H11_4243 0.78 -0.2 13,099 - Ac3H11_4243 0.78 +2.5 13,099 - Ac3H11_4243 0.78 +1.3 13,099 - Ac3H11_4243 0.78 +2.0 13,140 + Ac3H11_4243 0.83 +1.7 13,140 + Ac3H11_4243 0.83 -2.2 13,141 - Ac3H11_4243 0.83 -1.8 13,141 - Ac3H11_4243 0.83 -2.7
Or see this region's nucleotide sequence