Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3805 and Ac3H11_3806 overlap by 41 nucleotides Ac3H11_3806 and Ac3H11_3807 overlap by 8 nucleotides Ac3H11_3807 and Ac3H11_3808 are separated by 65 nucleotides
Ac3H11_3805 - Iron-sulfur cluster-binding protein, at 17,458 to 19,527
_3805
Ac3H11_3806 - FIG00433900: hypothetical protein, at 19,487 to 20,203
_3806
Ac3H11_3807 - FIG00431662: hypothetical protein, at 20,196 to 20,756
_3807
Ac3H11_3808 - tungsten-containing formate dehydrogenase alpha subunit, at 20,822 to 23,707
_3808
Position (kb) 19
20
21 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 18.650 kb on + strand, within Ac3H11_3805 at 18.651 kb on - strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.737 kb on + strand, within Ac3H11_3805 at 18.738 kb on - strand, within Ac3H11_3805 at 19.208 kb on + strand, within Ac3H11_3805 at 19.208 kb on + strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.642 kb on + strand, within Ac3H11_3806 at 19.643 kb on - strand, within Ac3H11_3806 at 19.643 kb on - strand, within Ac3H11_3806 at 19.658 kb on + strand, within Ac3H11_3806 at 19.731 kb on - strand, within Ac3H11_3806 at 19.872 kb on + strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 20.326 kb on + strand, within Ac3H11_3807 at 20.327 kb on - strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.481 kb on - strand, within Ac3H11_3807 at 20.481 kb on - strand, within Ac3H11_3807 at 20.542 kb on + strand, within Ac3H11_3807 at 20.543 kb on - strand, within Ac3H11_3807 at 20.769 kb on + strand at 20.770 kb on - strand at 20.865 kb on + strand at 20.865 kb on + strand at 20.865 kb on + strand at 20.938 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 18,650 + Ac3H11_3805 0.58 +2.8 18,651 - Ac3H11_3805 0.58 +0.8 18,737 + Ac3H11_3805 0.62 +1.8 18,737 + Ac3H11_3805 0.62 -1.8 18,737 + Ac3H11_3805 0.62 +1.1 18,737 + Ac3H11_3805 0.62 -3.1 18,737 + Ac3H11_3805 0.62 +0.4 18,737 + Ac3H11_3805 0.62 +0.3 18,738 - Ac3H11_3805 0.62 -0.4 19,208 + Ac3H11_3805 0.85 -0.4 19,208 + Ac3H11_3805 0.85 -0.5 19,209 - Ac3H11_3805 0.85 +0.3 19,209 - Ac3H11_3805 0.85 +0.3 19,209 - Ac3H11_3805 0.85 -0.1 19,642 + Ac3H11_3806 0.22 -2.3 19,643 - Ac3H11_3806 0.22 -3.3 19,643 - Ac3H11_3806 0.22 +0.6 19,658 + Ac3H11_3806 0.24 -1.1 19,731 - Ac3H11_3806 0.34 +0.3 19,872 + Ac3H11_3806 0.54 +2.9 19,873 - Ac3H11_3806 0.54 -3.2 19,873 - Ac3H11_3806 0.54 +0.8 19,873 - Ac3H11_3806 0.54 +0.6 19,884 + Ac3H11_3806 0.55 -0.7 19,884 + Ac3H11_3806 0.55 -2.2 19,884 + Ac3H11_3806 0.55 +3.0 19,884 + Ac3H11_3806 0.55 -2.9 19,884 + Ac3H11_3806 0.55 +1.0 19,884 + Ac3H11_3806 0.55 -0.4 19,884 + Ac3H11_3806 0.55 +2.1 19,884 + Ac3H11_3806 0.55 +1.7 19,885 - Ac3H11_3806 0.56 -0.8 19,885 - Ac3H11_3806 0.56 +0.0 19,885 - Ac3H11_3806 0.56 -0.7 19,885 - Ac3H11_3806 0.56 -2.0 19,885 - Ac3H11_3806 0.56 +0.5 20,326 + Ac3H11_3807 0.23 +0.2 20,327 - Ac3H11_3807 0.23 +2.5 20,428 + Ac3H11_3807 0.41 +1.6 20,428 + Ac3H11_3807 0.41 +0.6 20,428 + Ac3H11_3807 0.41 +1.3 20,429 - Ac3H11_3807 0.42 +2.1 20,429 - Ac3H11_3807 0.42 -0.7 20,429 - Ac3H11_3807 0.42 -2.1 20,481 - Ac3H11_3807 0.51 +0.8 20,481 - Ac3H11_3807 0.51 +3.8 20,542 + Ac3H11_3807 0.62 +0.7 20,543 - Ac3H11_3807 0.62 +2.9 20,769 + -1.0 20,770 - +0.4 20,865 + +0.8 20,865 + -0.8 20,865 + +1.0 20,938 - +0.2
Or see this region's nucleotide sequence