Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3719 and Ac3H11_3720 are separated by 160 nucleotides Ac3H11_3720 and Ac3H11_3721 are separated by 583 nucleotides Ac3H11_3721 and Ac3H11_3722 are separated by 59 nucleotides
Ac3H11_3719 - FIG00978734: hypothetical protein, at 78,394 to 79,617
_3719
Ac3H11_3720 - Uncharacterized PLP-dependent aminotransferase YfdZ, at 79,778 to 81,004
_3720
Ac3H11_3721 - hypothetical protein, at 81,588 to 81,779
_3721
Ac3H11_3722 - Urease accessory protein UreD, at 81,839 to 82,675
_3722
Position (kb) 79
80
81
82 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.112 kb on - strand, within Ac3H11_3719 at 79.512 kb on + strand at 79.554 kb on + strand at 79.554 kb on + strand at 79.555 kb on - strand at 79.700 kb on + strand at 79.700 kb on + strand at 79.700 kb on + strand at 79.701 kb on - strand at 79.833 kb on - strand at 79.833 kb on - strand at 79.985 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.037 kb on - strand, within Ac3H11_3720 at 80.172 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.409 kb on + strand, within Ac3H11_3720 at 80.410 kb on - strand, within Ac3H11_3720 at 80.414 kb on + strand, within Ac3H11_3720 at 80.414 kb on + strand, within Ac3H11_3720 at 80.415 kb on - strand, within Ac3H11_3720 at 80.429 kb on + strand, within Ac3H11_3720 at 80.429 kb on + strand, within Ac3H11_3720 at 80.430 kb on - strand, within Ac3H11_3720 at 80.513 kb on + strand, within Ac3H11_3720 at 80.514 kb on - strand, within Ac3H11_3720 at 80.591 kb on + strand, within Ac3H11_3720 at 80.592 kb on - strand, within Ac3H11_3720 at 80.600 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.008 kb on - strand at 81.008 kb on - strand at 81.036 kb on + strand at 81.037 kb on - strand at 81.037 kb on - strand at 81.131 kb on + strand at 81.131 kb on + strand at 81.172 kb on + strand at 81.172 kb on + strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.203 kb on - strand at 81.203 kb on - strand at 81.203 kb on - strand at 81.214 kb on + strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.299 kb on + strand at 81.299 kb on + strand at 81.300 kb on - strand at 81.325 kb on + strand at 81.368 kb on - strand at 81.389 kb on + strand at 81.390 kb on - strand at 81.390 kb on - strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.411 kb on - strand at 81.411 kb on - strand at 81.432 kb on + strand at 81.432 kb on + strand at 81.433 kb on - strand at 81.433 kb on - strand at 81.436 kb on + strand at 81.436 kb on + strand at 81.436 kb on + strand at 81.437 kb on - strand at 81.437 kb on - strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.542 kb on - strand at 81.542 kb on - strand at 81.636 kb on + strand, within Ac3H11_3721 at 81.637 kb on - strand, within Ac3H11_3721 at 81.690 kb on + strand, within Ac3H11_3721 at 81.690 kb on + strand, within Ac3H11_3721 at 81.691 kb on - strand, within Ac3H11_3721 at 81.691 kb on - strand, within Ac3H11_3721 at 81.711 kb on + strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.841 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 79,111 + Ac3H11_3719 0.59 +3.5 79,111 + Ac3H11_3719 0.59 -2.1 79,111 + Ac3H11_3719 0.59 +0.4 79,111 + Ac3H11_3719 0.59 +1.9 79,111 + Ac3H11_3719 0.59 -2.8 79,112 - Ac3H11_3719 0.59 +3.2 79,512 + -1.2 79,554 + -1.8 79,554 + +0.1 79,555 - +0.1 79,700 + +0.3 79,700 + -0.1 79,700 + -3.5 79,701 - +0.5 79,833 - +3.3 79,833 - +1.5 79,985 + Ac3H11_3720 0.17 +0.4 80,036 + Ac3H11_3720 0.21 +0.8 80,036 + Ac3H11_3720 0.21 +1.8 80,036 + Ac3H11_3720 0.21 +0.3 80,037 - Ac3H11_3720 0.21 +0.8 80,172 - Ac3H11_3720 0.32 -2.3 80,187 - Ac3H11_3720 0.33 +0.8 80,187 - Ac3H11_3720 0.33 +1.1 80,187 - Ac3H11_3720 0.33 +1.6 80,187 - Ac3H11_3720 0.33 +2.0 80,283 - Ac3H11_3720 0.41 -0.8 80,283 - Ac3H11_3720 0.41 -1.1 80,283 - Ac3H11_3720 0.41 -3.1 80,409 + Ac3H11_3720 0.51 -0.2 80,410 - Ac3H11_3720 0.52 -2.4 80,414 + Ac3H11_3720 0.52 +0.5 80,414 + Ac3H11_3720 0.52 +1.6 80,415 - Ac3H11_3720 0.52 +1.5 80,429 + Ac3H11_3720 0.53 +1.2 80,429 + Ac3H11_3720 0.53 -2.8 80,430 - Ac3H11_3720 0.53 -3.1 80,513 + Ac3H11_3720 0.60 -0.2 80,514 - Ac3H11_3720 0.60 +0.1 80,591 + Ac3H11_3720 0.66 -1.7 80,592 - Ac3H11_3720 0.66 +1.7 80,600 + Ac3H11_3720 0.67 +1.7 80,708 + Ac3H11_3720 0.76 +0.1 80,708 + Ac3H11_3720 0.76 +0.2 80,708 + Ac3H11_3720 0.76 +0.9 80,708 + Ac3H11_3720 0.76 +0.9 80,709 - Ac3H11_3720 0.76 +1.6 80,709 - Ac3H11_3720 0.76 -1.2 80,709 - Ac3H11_3720 0.76 +0.4 80,709 - Ac3H11_3720 0.76 +0.1 80,709 - Ac3H11_3720 0.76 -0.8 80,762 + Ac3H11_3720 0.80 +0.3 80,762 + Ac3H11_3720 0.80 +0.5 80,762 + Ac3H11_3720 0.80 -1.4 80,762 + Ac3H11_3720 0.80 +1.9 80,762 + Ac3H11_3720 0.80 -0.3 80,762 + Ac3H11_3720 0.80 -1.1 80,762 + Ac3H11_3720 0.80 +0.8 80,763 - Ac3H11_3720 0.80 -0.7 80,763 - Ac3H11_3720 0.80 +1.8 80,763 - Ac3H11_3720 0.80 -1.2 80,763 - Ac3H11_3720 0.80 -2.6 80,763 - Ac3H11_3720 0.80 -0.7 80,888 + -3.8 80,888 + +0.8 80,888 + +2.3 80,888 + +0.8 80,888 + +1.2 80,888 + -1.2 80,888 + -2.9 80,889 - -0.7 80,889 - -3.3 80,889 - +0.2 80,889 - +2.4 80,889 - -0.1 80,889 - +2.1 80,889 - -1.4 81,007 + -2.4 81,007 + +1.3 81,007 + +0.0 81,007 + +1.5 81,007 + -2.3 81,008 - +3.4 81,008 - -0.8 81,036 + +0.5 81,037 - -2.8 81,037 - +0.6 81,131 + -1.4 81,131 + -2.2 81,172 + +0.2 81,172 + +0.4 81,173 - +0.5 81,173 - +1.0 81,173 - +0.1 81,173 - -2.2 81,173 - +0.1 81,203 - +2.2 81,203 - -3.6 81,203 - -0.5 81,214 + -0.6 81,215 - +0.2 81,215 - -3.3 81,215 - -1.3 81,215 - +1.8 81,299 + -0.6 81,299 + +0.4 81,300 - -4.2 81,325 + -1.1 81,368 - -0.2 81,389 + -1.5 81,390 - -1.3 81,390 - -2.1 81,410 + +1.2 81,410 + -1.3 81,410 + -1.2 81,410 + +1.6 81,410 + +1.3 81,411 - -0.8 81,411 - -0.0 81,432 + +1.1 81,432 + +0.7 81,433 - +1.1 81,433 - -0.9 81,436 + +2.1 81,436 + +1.0 81,436 + -2.2 81,437 - +1.6 81,437 - -0.9 81,541 + -0.1 81,541 + -2.8 81,541 + -2.5 81,541 + +1.2 81,542 - -1.1 81,542 - -0.2 81,636 + Ac3H11_3721 0.25 +2.7 81,637 - Ac3H11_3721 0.26 -1.4 81,690 + Ac3H11_3721 0.53 -0.7 81,690 + Ac3H11_3721 0.53 -1.6 81,691 - Ac3H11_3721 0.54 +1.7 81,691 - Ac3H11_3721 0.54 +0.7 81,711 + Ac3H11_3721 0.64 +1.4 81,712 - Ac3H11_3721 0.65 +1.5 81,712 - Ac3H11_3721 0.65 +1.3 81,712 - Ac3H11_3721 0.65 +0.8 81,712 - Ac3H11_3721 0.65 -0.4 81,712 - Ac3H11_3721 0.65 +2.9 81,712 - Ac3H11_3721 0.65 -0.5 81,713 + Ac3H11_3721 0.65 +0.5 81,713 + Ac3H11_3721 0.65 -3.6 81,713 + Ac3H11_3721 0.65 -0.7 81,713 + Ac3H11_3721 0.65 -2.7 81,713 + Ac3H11_3721 0.65 +1.5 81,713 + Ac3H11_3721 0.65 -0.2 81,713 + Ac3H11_3721 0.65 -2.7 81,714 - Ac3H11_3721 0.66 +1.3 81,714 - Ac3H11_3721 0.66 +2.2 81,714 - Ac3H11_3721 0.66 -1.9 81,714 - Ac3H11_3721 0.66 -0.2 81,714 - Ac3H11_3721 0.66 -0.4 81,714 - Ac3H11_3721 0.66 -2.5 81,779 + -1.8 81,779 + +0.6 81,779 + +1.8 81,779 + +1.1 81,779 + +0.7 81,780 - -0.2 81,780 - +2.0 81,780 - +1.8 81,780 - -1.8 81,780 - -2.5 81,840 + +0.6 81,840 + -0.6 81,840 + +1.0 81,840 + +1.4 81,841 - -0.7
Or see this region's nucleotide sequence