Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3707 and Ac3H11_3708 are separated by 257 nucleotides Ac3H11_3708 and Ac3H11_3709 are separated by 12 nucleotides Ac3H11_3709 and Ac3H11_3710 are separated by 113 nucleotides
Ac3H11_3707 - Membrane-associated phospholipid phosphatase (EC 3.1.3.27), at 67,502 to 68,398
_3707
Ac3H11_3708 - Transcription regulator [contains diacylglycerol kinase catalytic domain], at 68,656 to 69,720
_3708
Ac3H11_3709 - Probable DNA repair exonuclease, at 69,733 to 70,527
_3709
Ac3H11_3710 - Outer membrane protein (porin), at 70,641 to 71,825
_3710
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 67.737 kb on + strand, within Ac3H11_3707 at 67.752 kb on + strand, within Ac3H11_3707 at 67.752 kb on + strand, within Ac3H11_3707 at 67.752 kb on + strand, within Ac3H11_3707 at 67.753 kb on - strand, within Ac3H11_3707 at 67.753 kb on - strand, within Ac3H11_3707 at 67.753 kb on - strand, within Ac3H11_3707 at 67.794 kb on + strand, within Ac3H11_3707 at 67.794 kb on + strand, within Ac3H11_3707 at 67.795 kb on - strand, within Ac3H11_3707 at 68.463 kb on + strand at 68.499 kb on + strand at 68.499 kb on + strand at 68.499 kb on + strand at 68.499 kb on + strand at 68.500 kb on - strand at 68.500 kb on - strand at 68.500 kb on - strand at 68.519 kb on + strand at 68.519 kb on + strand at 68.519 kb on + strand at 68.519 kb on + strand at 68.519 kb on + strand at 68.519 kb on + strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.520 kb on - strand at 68.977 kb on + strand, within Ac3H11_3708 at 68.978 kb on - strand, within Ac3H11_3708 at 68.978 kb on - strand, within Ac3H11_3708 at 70.054 kb on + strand, within Ac3H11_3709 at 70.054 kb on + strand, within Ac3H11_3709 at 70.054 kb on + strand, within Ac3H11_3709 at 70.054 kb on + strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.055 kb on - strand, within Ac3H11_3709 at 70.468 kb on + strand at 70.468 kb on + strand at 70.642 kb on + strand at 70.642 kb on + strand at 70.642 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 67,737 + Ac3H11_3707 0.26 +1.6 67,752 + Ac3H11_3707 0.28 +2.3 67,752 + Ac3H11_3707 0.28 -1.0 67,752 + Ac3H11_3707 0.28 +0.3 67,753 - Ac3H11_3707 0.28 +0.9 67,753 - Ac3H11_3707 0.28 -0.8 67,753 - Ac3H11_3707 0.28 -1.7 67,794 + Ac3H11_3707 0.33 -0.0 67,794 + Ac3H11_3707 0.33 +2.4 67,795 - Ac3H11_3707 0.33 -1.5 68,463 + +2.3 68,499 + -0.7 68,499 + -1.9 68,499 + +0.9 68,499 + +3.6 68,500 - -1.8 68,500 - +1.1 68,500 - -3.6 68,519 + -0.3 68,519 + -2.0 68,519 + -1.7 68,519 + +0.2 68,519 + -1.6 68,519 + -0.4 68,520 - +1.2 68,520 - +0.2 68,520 - -1.1 68,520 - +1.6 68,520 - -0.8 68,520 - -0.8 68,520 - +0.9 68,520 - +0.1 68,977 + Ac3H11_3708 0.30 -0.9 68,978 - Ac3H11_3708 0.30 +2.2 68,978 - Ac3H11_3708 0.30 +1.4 70,054 + Ac3H11_3709 0.40 -0.1 70,054 + Ac3H11_3709 0.40 +2.2 70,054 + Ac3H11_3709 0.40 -1.4 70,054 + Ac3H11_3709 0.40 -0.4 70,055 - Ac3H11_3709 0.41 -1.0 70,055 - Ac3H11_3709 0.41 +2.4 70,055 - Ac3H11_3709 0.41 +1.1 70,055 - Ac3H11_3709 0.41 +1.4 70,055 - Ac3H11_3709 0.41 +0.5 70,055 - Ac3H11_3709 0.41 +1.8 70,468 + +1.3 70,468 + -1.7 70,642 + -1.8 70,642 + -0.5 70,642 + +1.6
Or see this region's nucleotide sequence