Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3533 and Ac3H11_3534 overlap by 9 nucleotides Ac3H11_3534 and Ac3H11_3535 are separated by 27 nucleotides Ac3H11_3535 and Ac3H11_3536 are separated by 87 nucleotides Ac3H11_3536 and Ac3H11_3537 are separated by 66 nucleotides
Ac3H11_3533 - Glutaryl-CoA dehydrogenase (EC 1.3.99.7), at 79,353 to 80,549
_3533
Ac3H11_3534 - hypothetical protein, at 80,541 to 80,702
_3534
Ac3H11_3535 - Glycine cleavage system transcriptional activator, at 80,730 to 81,674
_3535
Ac3H11_3536 - hypothetical protein, at 81,762 to 81,977
_3536
Ac3H11_3537 - TPR domain protein, putative component of TonB system, at 82,044 to 83,612
_3537
Position (kb) 80
81
82 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.069 kb on - strand, within Ac3H11_3533 at 80.086 kb on + strand, within Ac3H11_3533 at 80.086 kb on + strand, within Ac3H11_3533 at 80.086 kb on + strand, within Ac3H11_3533 at 80.087 kb on - strand, within Ac3H11_3533 at 80.087 kb on - strand, within Ac3H11_3533 at 80.182 kb on + strand, within Ac3H11_3533 at 80.182 kb on + strand, within Ac3H11_3533 at 80.182 kb on + strand, within Ac3H11_3533 at 80.183 kb on - strand, within Ac3H11_3533 at 80.183 kb on - strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.314 kb on + strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.315 kb on - strand, within Ac3H11_3533 at 80.336 kb on - strand, within Ac3H11_3533 at 80.455 kb on + strand at 80.456 kb on - strand at 80.605 kb on + strand, within Ac3H11_3534 at 80.606 kb on - strand, within Ac3H11_3534 at 80.606 kb on - strand, within Ac3H11_3534 at 80.606 kb on - strand, within Ac3H11_3534 at 80.668 kb on - strand, within Ac3H11_3534 at 80.674 kb on + strand, within Ac3H11_3534 at 80.700 kb on + strand at 80.700 kb on + strand at 80.712 kb on + strand at 80.796 kb on + strand at 80.796 kb on + strand at 80.797 kb on - strand at 80.797 kb on - strand at 80.797 kb on - strand at 80.797 kb on - strand at 80.934 kb on + strand, within Ac3H11_3535 at 80.934 kb on + strand, within Ac3H11_3535 at 80.934 kb on + strand, within Ac3H11_3535 at 80.934 kb on + strand, within Ac3H11_3535 at 81.168 kb on + strand, within Ac3H11_3535 at 81.168 kb on + strand, within Ac3H11_3535 at 81.168 kb on + strand, within Ac3H11_3535 at 81.168 kb on + strand, within Ac3H11_3535 at 81.168 kb on + strand, within Ac3H11_3535 at 81.169 kb on - strand, within Ac3H11_3535 at 81.169 kb on - strand, within Ac3H11_3535 at 81.169 kb on - strand, within Ac3H11_3535 at 81.169 kb on - strand, within Ac3H11_3535 at 81.169 kb on - strand, within Ac3H11_3535 at 81.364 kb on - strand, within Ac3H11_3535 at 81.429 kb on + strand, within Ac3H11_3535 at 81.429 kb on + strand, within Ac3H11_3535 at 81.570 kb on + strand, within Ac3H11_3535 at 81.570 kb on + strand, within Ac3H11_3535 at 81.570 kb on + strand, within Ac3H11_3535 at 81.570 kb on + strand, within Ac3H11_3535 at 81.571 kb on - strand, within Ac3H11_3535 at 81.571 kb on - strand, within Ac3H11_3535 at 81.571 kb on - strand, within Ac3H11_3535 at 81.573 kb on + strand, within Ac3H11_3535 at 81.573 kb on + strand, within Ac3H11_3535 at 81.573 kb on + strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.574 kb on - strand, within Ac3H11_3535 at 81.703 kb on + strand at 81.703 kb on + strand at 81.704 kb on - strand at 81.704 kb on - strand at 81.704 kb on - strand at 81.771 kb on + strand at 81.771 kb on + strand at 81.771 kb on + strand at 81.772 kb on - strand at 81.772 kb on - strand at 81.772 kb on - strand at 81.975 kb on + strand at 81.975 kb on + strand at 81.976 kb on - strand at 82.144 kb on + strand at 82.144 kb on + strand at 82.144 kb on + strand at 82.215 kb on + strand, within Ac3H11_3537 at 82.231 kb on + strand, within Ac3H11_3537 at 82.231 kb on + strand, within Ac3H11_3537 at 82.232 kb on - strand, within Ac3H11_3537 at 82.232 kb on - strand, within Ac3H11_3537 at 82.318 kb on + strand, within Ac3H11_3537 at 82.318 kb on + strand, within Ac3H11_3537 at 82.319 kb on - strand, within Ac3H11_3537 at 82.319 kb on - strand, within Ac3H11_3537 at 82.319 kb on - strand, within Ac3H11_3537 at 82.460 kb on + strand, within Ac3H11_3537 at 82.461 kb on - strand, within Ac3H11_3537 at 82.461 kb on - strand, within Ac3H11_3537 at 82.541 kb on + strand, within Ac3H11_3537 at 82.541 kb on + strand, within Ac3H11_3537 at 82.555 kb on + strand, within Ac3H11_3537 at 82.591 kb on + strand, within Ac3H11_3537 at 82.592 kb on - strand, within Ac3H11_3537 at 82.627 kb on + strand, within Ac3H11_3537 at 82.627 kb on + strand, within Ac3H11_3537 at 82.627 kb on + strand, within Ac3H11_3537 at 82.628 kb on - strand, within Ac3H11_3537 at 82.628 kb on - strand, within Ac3H11_3537 at 82.628 kb on - strand, within Ac3H11_3537 at 82.628 kb on - strand, within Ac3H11_3537 at 82.628 kb on - strand, within Ac3H11_3537
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 80,069 - Ac3H11_3533 0.60 +0.6 80,069 - Ac3H11_3533 0.60 +2.1 80,069 - Ac3H11_3533 0.60 -0.8 80,069 - Ac3H11_3533 0.60 -1.4 80,069 - Ac3H11_3533 0.60 +0.1 80,069 - Ac3H11_3533 0.60 -3.4 80,069 - Ac3H11_3533 0.60 +0.5 80,069 - Ac3H11_3533 0.60 +0.8 80,086 + Ac3H11_3533 0.61 +1.2 80,086 + Ac3H11_3533 0.61 +0.9 80,086 + Ac3H11_3533 0.61 -0.7 80,087 - Ac3H11_3533 0.61 -0.6 80,087 - Ac3H11_3533 0.61 -1.0 80,182 + Ac3H11_3533 0.69 +1.2 80,182 + Ac3H11_3533 0.69 -1.0 80,182 + Ac3H11_3533 0.69 -2.0 80,183 - Ac3H11_3533 0.69 -2.1 80,183 - Ac3H11_3533 0.69 +0.3 80,314 + Ac3H11_3533 0.80 +1.4 80,314 + Ac3H11_3533 0.80 -0.8 80,314 + Ac3H11_3533 0.80 +1.1 80,314 + Ac3H11_3533 0.80 -1.3 80,314 + Ac3H11_3533 0.80 +1.2 80,314 + Ac3H11_3533 0.80 +1.3 80,314 + Ac3H11_3533 0.80 -0.7 80,315 - Ac3H11_3533 0.80 +2.1 80,315 - Ac3H11_3533 0.80 +1.6 80,315 - Ac3H11_3533 0.80 -0.7 80,315 - Ac3H11_3533 0.80 -1.8 80,315 - Ac3H11_3533 0.80 -3.3 80,315 - Ac3H11_3533 0.80 -0.1 80,336 - Ac3H11_3533 0.82 -0.2 80,455 + -0.1 80,456 - +0.4 80,605 + Ac3H11_3534 0.40 -1.4 80,606 - Ac3H11_3534 0.40 -3.0 80,606 - Ac3H11_3534 0.40 +1.6 80,606 - Ac3H11_3534 0.40 +1.1 80,668 - Ac3H11_3534 0.78 +0.3 80,674 + Ac3H11_3534 0.82 +0.3 80,700 + -2.1 80,700 + -0.3 80,712 + +1.6 80,796 + +0.5 80,796 + -0.3 80,797 - +0.2 80,797 - +1.1 80,797 - +2.6 80,797 - +1.3 80,934 + Ac3H11_3535 0.22 +2.1 80,934 + Ac3H11_3535 0.22 +0.2 80,934 + Ac3H11_3535 0.22 -0.4 80,934 + Ac3H11_3535 0.22 +1.7 81,168 + Ac3H11_3535 0.46 -0.5 81,168 + Ac3H11_3535 0.46 +0.8 81,168 + Ac3H11_3535 0.46 +0.0 81,168 + Ac3H11_3535 0.46 -3.4 81,168 + Ac3H11_3535 0.46 +1.8 81,169 - Ac3H11_3535 0.46 -2.6 81,169 - Ac3H11_3535 0.46 +1.2 81,169 - Ac3H11_3535 0.46 -3.6 81,169 - Ac3H11_3535 0.46 -1.9 81,169 - Ac3H11_3535 0.46 +1.3 81,364 - Ac3H11_3535 0.67 +0.4 81,429 + Ac3H11_3535 0.74 +1.2 81,429 + Ac3H11_3535 0.74 -1.1 81,570 + Ac3H11_3535 0.89 +0.5 81,570 + Ac3H11_3535 0.89 -3.1 81,570 + Ac3H11_3535 0.89 +0.5 81,570 + Ac3H11_3535 0.89 +2.0 81,571 - Ac3H11_3535 0.89 +1.5 81,571 - Ac3H11_3535 0.89 +1.3 81,571 - Ac3H11_3535 0.89 +0.3 81,573 + Ac3H11_3535 0.89 +2.4 81,573 + Ac3H11_3535 0.89 -0.1 81,573 + Ac3H11_3535 0.89 -2.9 81,574 - Ac3H11_3535 0.89 +1.0 81,574 - Ac3H11_3535 0.89 -0.4 81,574 - Ac3H11_3535 0.89 -1.5 81,574 - Ac3H11_3535 0.89 +0.3 81,574 - Ac3H11_3535 0.89 -0.8 81,574 - Ac3H11_3535 0.89 +0.7 81,574 - Ac3H11_3535 0.89 +0.6 81,703 + +2.1 81,703 + -3.6 81,704 - +0.8 81,704 - +0.6 81,704 - +2.3 81,771 + -1.9 81,771 + +0.8 81,771 + +0.8 81,772 - -0.0 81,772 - -1.2 81,772 - +1.5 81,975 + -0.5 81,975 + +0.6 81,976 - -3.3 82,144 + -0.7 82,144 + -0.7 82,144 + -0.2 82,215 + Ac3H11_3537 0.11 +1.5 82,231 + Ac3H11_3537 0.12 -0.8 82,231 + Ac3H11_3537 0.12 +0.1 82,232 - Ac3H11_3537 0.12 +0.6 82,232 - Ac3H11_3537 0.12 -0.2 82,318 + Ac3H11_3537 0.17 -0.7 82,318 + Ac3H11_3537 0.17 +2.2 82,319 - Ac3H11_3537 0.18 -3.6 82,319 - Ac3H11_3537 0.18 -2.9 82,319 - Ac3H11_3537 0.18 -1.3 82,460 + Ac3H11_3537 0.27 -1.5 82,461 - Ac3H11_3537 0.27 +1.8 82,461 - Ac3H11_3537 0.27 -0.2 82,541 + Ac3H11_3537 0.32 -4.3 82,541 + Ac3H11_3537 0.32 -1.2 82,555 + Ac3H11_3537 0.33 +0.4 82,591 + Ac3H11_3537 0.35 -3.2 82,592 - Ac3H11_3537 0.35 +0.0 82,627 + Ac3H11_3537 0.37 -0.3 82,627 + Ac3H11_3537 0.37 +1.9 82,627 + Ac3H11_3537 0.37 +0.5 82,628 - Ac3H11_3537 0.37 -0.5 82,628 - Ac3H11_3537 0.37 +0.3 82,628 - Ac3H11_3537 0.37 -1.9 82,628 - Ac3H11_3537 0.37 +0.7 82,628 - Ac3H11_3537 0.37 -3.2
Or see this region's nucleotide sequence