Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3464 and Ac3H11_3465 overlap by 4 nucleotides Ac3H11_3465 and Ac3H11_3466 overlap by 1 nucleotides Ac3H11_3466 and Ac3H11_3467 are separated by 3 nucleotides Ac3H11_3467 and Ac3H11_3468 are separated by 23 nucleotides Ac3H11_3468 and Ac3H11_3469 overlap by 4 nucleotides
Ac3H11_3464 - hypothetical protein, at 17,120 to 17,512
_3464
Ac3H11_3465 - hypothetical protein, at 17,509 to 18,021
_3465
Ac3H11_3466 - Chromosome (plasmid) partitioning protein ParB, at 18,021 to 20,156
_3466
Ac3H11_3467 - hypothetical protein, at 20,160 to 20,420
_3467
Ac3H11_3468 - COG1896: Predicted hydrolases of HD superfamily, at 20,444 to 21,097
_3468
Ac3H11_3469 - hypothetical protein, at 21,094 to 21,453
_3469
Position (kb) 18
19
20
21 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 17.057 kb on + strand at 17.058 kb on - strand at 17.058 kb on - strand at 17.194 kb on + strand, within Ac3H11_3464 at 17.194 kb on + strand, within Ac3H11_3464 at 17.371 kb on - strand, within Ac3H11_3464 at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.552 kb on - strand at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.792 kb on + strand, within Ac3H11_3465 at 18.027 kb on - strand at 18.043 kb on + strand at 18.043 kb on + strand at 18.131 kb on + strand at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.544 kb on - strand, within Ac3H11_3466 at 18.688 kb on + strand, within Ac3H11_3466 at 18.790 kb on + strand, within Ac3H11_3466 at 18.791 kb on - strand, within Ac3H11_3466 at 18.900 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466 at 19.118 kb on - strand, within Ac3H11_3466 at 19.118 kb on - strand, within Ac3H11_3466 at 19.294 kb on + strand, within Ac3H11_3466 at 19.294 kb on + strand, within Ac3H11_3466 at 19.294 kb on + strand, within Ac3H11_3466 at 19.295 kb on - strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.575 kb on + strand, within Ac3H11_3466 at 19.576 kb on - strand, within Ac3H11_3466 at 19.576 kb on - strand, within Ac3H11_3466 at 19.831 kb on + strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.832 kb on - strand, within Ac3H11_3466 at 19.906 kb on - strand, within Ac3H11_3466 at 19.906 kb on - strand, within Ac3H11_3466 at 20.020 kb on + strand at 20.072 kb on - strand at 20.161 kb on + strand at 20.161 kb on + strand at 20.260 kb on + strand, within Ac3H11_3467 at 20.510 kb on + strand, within Ac3H11_3468 at 20.510 kb on + strand, within Ac3H11_3468 at 20.510 kb on + strand, within Ac3H11_3468 at 20.661 kb on + strand, within Ac3H11_3468 at 20.661 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.705 kb on + strand, within Ac3H11_3468 at 20.732 kb on + strand, within Ac3H11_3468 at 20.732 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 20.847 kb on + strand, within Ac3H11_3468 at 21.021 kb on + strand, within Ac3H11_3468 at 21.021 kb on + strand, within Ac3H11_3468 at 21.054 kb on + strand at 21.054 kb on + strand at 21.054 kb on + strand at 21.054 kb on + strand at 21.087 kb on + strand at 21.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 17,057 + +0.4 17,058 - +1.4 17,058 - +0.3 17,194 + Ac3H11_3464 0.19 +0.4 17,194 + Ac3H11_3464 0.19 -3.6 17,371 - Ac3H11_3464 0.64 +0.2 17,551 + -1.0 17,551 + +0.5 17,551 + +3.2 17,551 + -1.3 17,551 + +0.3 17,552 - +1.3 17,611 + Ac3H11_3465 0.20 +1.9 17,611 + Ac3H11_3465 0.20 -0.2 17,611 + Ac3H11_3465 0.20 -1.7 17,611 + Ac3H11_3465 0.20 +1.7 17,611 + Ac3H11_3465 0.20 +1.0 17,612 - Ac3H11_3465 0.20 +0.3 17,612 - Ac3H11_3465 0.20 -1.0 17,612 - Ac3H11_3465 0.20 +0.8 17,684 + Ac3H11_3465 0.34 +2.7 17,684 + Ac3H11_3465 0.34 -4.1 17,685 - Ac3H11_3465 0.34 -3.0 17,685 - Ac3H11_3465 0.34 -0.2 17,687 + Ac3H11_3465 0.35 +0.6 17,687 + Ac3H11_3465 0.35 -0.2 17,687 + Ac3H11_3465 0.35 -0.8 17,687 + Ac3H11_3465 0.35 +0.6 17,792 + Ac3H11_3465 0.55 +0.3 18,027 - -2.0 18,043 + +0.2 18,043 + -0.4 18,131 + +1.3 18,543 + Ac3H11_3466 0.24 -1.1 18,543 + Ac3H11_3466 0.24 +1.9 18,543 + Ac3H11_3466 0.24 -0.1 18,543 + Ac3H11_3466 0.24 -1.4 18,544 - Ac3H11_3466 0.24 +0.2 18,688 + Ac3H11_3466 0.31 +1.6 18,790 + Ac3H11_3466 0.36 +3.0 18,791 - Ac3H11_3466 0.36 +0.7 18,900 + Ac3H11_3466 0.41 +1.8 19,015 + Ac3H11_3466 0.47 +1.1 19,015 + Ac3H11_3466 0.47 -1.9 19,015 + Ac3H11_3466 0.47 -3.2 19,016 - Ac3H11_3466 0.47 +0.7 19,016 - Ac3H11_3466 0.47 -1.5 19,118 - Ac3H11_3466 0.51 -1.3 19,118 - Ac3H11_3466 0.51 -1.9 19,294 + Ac3H11_3466 0.60 +0.6 19,294 + Ac3H11_3466 0.60 -1.9 19,294 + Ac3H11_3466 0.60 -0.8 19,295 - Ac3H11_3466 0.60 -2.7 19,575 + Ac3H11_3466 0.73 +1.1 19,575 + Ac3H11_3466 0.73 +0.1 19,575 + Ac3H11_3466 0.73 +1.6 19,575 + Ac3H11_3466 0.73 -0.7 19,576 - Ac3H11_3466 0.73 -1.3 19,576 - Ac3H11_3466 0.73 +0.7 19,831 + Ac3H11_3466 0.85 +0.6 19,832 - Ac3H11_3466 0.85 -0.2 19,832 - Ac3H11_3466 0.85 +0.4 19,832 - Ac3H11_3466 0.85 +1.4 19,832 - Ac3H11_3466 0.85 -1.1 19,906 - Ac3H11_3466 0.88 +1.0 19,906 - Ac3H11_3466 0.88 +1.8 20,020 + -1.0 20,072 - +0.5 20,161 + -0.7 20,161 + -0.8 20,260 + Ac3H11_3467 0.38 +1.5 20,510 + Ac3H11_3468 0.10 -0.8 20,510 + Ac3H11_3468 0.10 -2.7 20,510 + Ac3H11_3468 0.10 +0.9 20,661 + Ac3H11_3468 0.33 -0.9 20,661 + Ac3H11_3468 0.33 -2.4 20,705 + Ac3H11_3468 0.40 +1.3 20,705 + Ac3H11_3468 0.40 +1.0 20,705 + Ac3H11_3468 0.40 +2.8 20,732 + Ac3H11_3468 0.44 +1.6 20,732 + Ac3H11_3468 0.44 -2.4 20,847 + Ac3H11_3468 0.62 +1.8 20,847 + Ac3H11_3468 0.62 -2.4 20,847 + Ac3H11_3468 0.62 -1.6 20,847 + Ac3H11_3468 0.62 +1.4 20,847 + Ac3H11_3468 0.62 +0.6 20,847 + Ac3H11_3468 0.62 +1.3 21,021 + Ac3H11_3468 0.88 +1.0 21,021 + Ac3H11_3468 0.88 -1.8 21,054 + +0.6 21,054 + +1.7 21,054 + +1.8 21,054 + +0.8 21,087 + -1.9 21,087 + +0.9
Or see this region's nucleotide sequence