Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3464 and Ac3H11_3465 overlap by 4 nucleotides Ac3H11_3465 and Ac3H11_3466 overlap by 1 nucleotides
Ac3H11_3464 - hypothetical protein, at 17,120 to 17,512
_3464
Ac3H11_3465 - hypothetical protein, at 17,509 to 18,021
_3465
Ac3H11_3466 - Chromosome (plasmid) partitioning protein ParB, at 18,021 to 20,156
_3466
Position (kb) 17
18
19 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 16.568 kb on + strand at 16.568 kb on - strand at 16.577 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.818 kb on + strand at 16.819 kb on - strand at 16.819 kb on - strand at 16.826 kb on + strand at 17.057 kb on + strand at 17.058 kb on - strand at 17.058 kb on - strand at 17.194 kb on + strand, within Ac3H11_3464 at 17.194 kb on + strand, within Ac3H11_3464 at 17.371 kb on - strand, within Ac3H11_3464 at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.552 kb on - strand at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.792 kb on + strand, within Ac3H11_3465 at 18.027 kb on - strand at 18.043 kb on + strand at 18.043 kb on + strand at 18.131 kb on + strand at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.544 kb on - strand, within Ac3H11_3466 at 18.688 kb on + strand, within Ac3H11_3466 at 18.790 kb on + strand, within Ac3H11_3466 at 18.791 kb on - strand, within Ac3H11_3466 at 18.900 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 16,568 + -2.1 16,568 - -0.7 16,577 + -1.3 16,747 + -1.6 16,747 + +0.0 16,747 + -2.7 16,747 + -1.2 16,747 + +1.6 16,747 + +1.1 16,747 + -0.8 16,747 + -0.8 16,747 + +1.5 16,748 - +1.4 16,748 - +2.0 16,748 - +0.2 16,748 - -0.4 16,818 + +1.0 16,819 - +0.0 16,819 - +1.3 16,826 + +0.3 17,057 + +0.4 17,058 - +1.4 17,058 - +0.3 17,194 + Ac3H11_3464 0.19 +0.4 17,194 + Ac3H11_3464 0.19 -3.6 17,371 - Ac3H11_3464 0.64 +0.2 17,551 + -1.0 17,551 + +0.5 17,551 + +3.2 17,551 + -1.3 17,551 + +0.3 17,552 - +1.3 17,611 + Ac3H11_3465 0.20 +1.9 17,611 + Ac3H11_3465 0.20 -0.2 17,611 + Ac3H11_3465 0.20 -1.7 17,611 + Ac3H11_3465 0.20 +1.7 17,611 + Ac3H11_3465 0.20 +1.0 17,612 - Ac3H11_3465 0.20 +0.3 17,612 - Ac3H11_3465 0.20 -1.0 17,612 - Ac3H11_3465 0.20 +0.8 17,684 + Ac3H11_3465 0.34 +2.7 17,684 + Ac3H11_3465 0.34 -4.1 17,685 - Ac3H11_3465 0.34 -3.0 17,685 - Ac3H11_3465 0.34 -0.2 17,687 + Ac3H11_3465 0.35 +0.6 17,687 + Ac3H11_3465 0.35 -0.2 17,687 + Ac3H11_3465 0.35 -0.8 17,687 + Ac3H11_3465 0.35 +0.6 17,792 + Ac3H11_3465 0.55 +0.3 18,027 - -2.0 18,043 + +0.2 18,043 + -0.4 18,131 + +1.3 18,543 + Ac3H11_3466 0.24 -1.1 18,543 + Ac3H11_3466 0.24 +1.9 18,543 + Ac3H11_3466 0.24 -0.1 18,543 + Ac3H11_3466 0.24 -1.4 18,544 - Ac3H11_3466 0.24 +0.2 18,688 + Ac3H11_3466 0.31 +1.6 18,790 + Ac3H11_3466 0.36 +3.0 18,791 - Ac3H11_3466 0.36 +0.7 18,900 + Ac3H11_3466 0.41 +1.8 19,015 + Ac3H11_3466 0.47 +1.1 19,015 + Ac3H11_3466 0.47 -1.9 19,015 + Ac3H11_3466 0.47 -3.2 19,016 - Ac3H11_3466 0.47 +0.7 19,016 - Ac3H11_3466 0.47 -1.5
Or see this region's nucleotide sequence