Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3357 and Ac3H11_3358 are separated by 160 nucleotides
Ac3H11_3357 - Zn-dependent protease with chaperone function PA4632, at 37,868 to 38,722
_3357
Ac3H11_3358 - AmpG permease, at 38,883 to 40,379
_3358
Position (kb) 38
39
40
41 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 37.893 kb on + strand at 37.893 kb on + strand at 37.894 kb on - strand at 37.894 kb on - strand at 37.894 kb on - strand at 38.322 kb on + strand, within Ac3H11_3357 at 38.322 kb on + strand, within Ac3H11_3357 at 38.322 kb on + strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.532 kb on + strand, within Ac3H11_3357 at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.751 kb on + strand at 38.752 kb on - strand at 38.752 kb on - strand at 38.818 kb on + strand at 38.819 kb on - strand at 38.819 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.835 kb on - strand at 39.030 kb on + strand at 39.031 kb on - strand at 39.031 kb on - strand at 39.180 kb on + strand, within Ac3H11_3358 at 39.180 kb on + strand, within Ac3H11_3358 at 39.181 kb on - strand, within Ac3H11_3358 at 39.459 kb on + strand, within Ac3H11_3358 at 39.571 kb on + strand, within Ac3H11_3358 at 39.627 kb on + strand, within Ac3H11_3358 at 39.628 kb on - strand, within Ac3H11_3358 at 39.628 kb on - strand, within Ac3H11_3358 at 39.864 kb on + strand, within Ac3H11_3358 at 39.865 kb on - strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.916 kb on - strand at 39.916 kb on - strand, within Ac3H11_3358 at 40.162 kb on - strand, within Ac3H11_3358 at 40.239 kb on + strand at 40.239 kb on + strand at 40.240 kb on - strand at 40.240 kb on - strand at 40.240 kb on - strand at 40.257 kb on + strand at 40.641 kb on + strand at 40.952 kb on + strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 41.018 kb on + strand at 41.018 kb on + strand at 41.018 kb on + strand at 41.019 kb on - strand at 41.019 kb on - strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.100 kb on - strand at 41.100 kb on - strand at 41.100 kb on - strand at 41.150 kb on + strand at 41.150 kb on + strand at 41.150 kb on + strand at 41.195 kb on - strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.312 kb on + strand at 41.313 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 37,893 + -2.9 37,893 + -1.8 37,894 - -0.1 37,894 - -1.6 37,894 - +0.3 38,322 + Ac3H11_3357 0.53 -4.4 38,322 + Ac3H11_3357 0.53 +1.1 38,322 + Ac3H11_3357 0.53 +4.0 38,323 - Ac3H11_3357 0.53 -0.5 38,323 - Ac3H11_3357 0.53 +0.4 38,323 - Ac3H11_3357 0.53 -2.3 38,323 - Ac3H11_3357 0.53 +2.0 38,323 - Ac3H11_3357 0.53 -0.6 38,323 - Ac3H11_3357 0.53 -1.3 38,323 - Ac3H11_3357 0.53 +2.0 38,323 - Ac3H11_3357 0.53 -0.9 38,532 + Ac3H11_3357 0.78 +0.8 38,722 + -1.5 38,722 + -2.8 38,722 + +1.7 38,722 + +1.0 38,722 + +0.1 38,722 + -0.2 38,722 + +1.9 38,722 + -1.6 38,722 + -0.1 38,723 - +1.2 38,723 - -0.3 38,723 - -2.1 38,723 - -1.1 38,751 + +1.2 38,752 - -0.9 38,752 - +0.6 38,818 + +0.0 38,819 - +0.4 38,819 - -2.2 38,832 - +0.1 38,832 - -3.0 38,832 - -0.1 38,832 - +0.9 38,834 + -2.1 38,834 + +2.0 38,834 + -0.9 38,835 - -2.4 39,030 + +2.9 39,031 - -1.7 39,031 - -2.4 39,180 + Ac3H11_3358 0.20 -2.0 39,180 + Ac3H11_3358 0.20 -1.8 39,181 - Ac3H11_3358 0.20 +1.0 39,459 + Ac3H11_3358 0.38 -3.1 39,571 + Ac3H11_3358 0.46 +0.1 39,627 + Ac3H11_3358 0.50 -2.8 39,628 - Ac3H11_3358 0.50 +0.1 39,628 - Ac3H11_3358 0.50 +0.1 39,864 + Ac3H11_3358 0.66 -0.9 39,865 - Ac3H11_3358 0.66 +2.1 39,915 + Ac3H11_3358 0.69 +0.8 39,915 + Ac3H11_3358 0.69 -3.6 39,915 + Ac3H11_3358 0.69 +0.6 39,916 - +3.1 39,916 - Ac3H11_3358 0.69 -1.2 40,162 - Ac3H11_3358 0.85 -1.3 40,239 + -0.2 40,239 + -2.1 40,240 - -2.7 40,240 - -0.3 40,240 - -3.0 40,257 + -1.1 40,641 + -2.6 40,952 + +1.3 40,953 - -1.1 40,953 - +0.9 40,953 - -1.8 40,953 - +0.7 40,953 - +0.3 40,953 - +1.1 41,018 + +0.9 41,018 + +1.5 41,018 + -1.9 41,019 - +1.2 41,019 - -1.9 41,099 + -1.5 41,099 + -2.8 41,099 + +1.5 41,099 + -0.5 41,100 - -2.8 41,100 - +0.9 41,100 - +1.0 41,150 + -2.3 41,150 + -0.3 41,150 + +0.8 41,195 - +1.5 41,243 + +1.1 41,243 + +1.6 41,243 + -1.5 41,243 + +1.5 41,243 + -3.0 41,243 + +0.6 41,244 - +1.9 41,244 - +1.1 41,244 - -2.5 41,244 - +2.6 41,244 - +1.0 41,244 - +1.1 41,312 + +1.7 41,313 - +2.1
Or see this region's nucleotide sequence