Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3122 and Ac3H11_3123 are separated by 161 nucleotides Ac3H11_3123 and Ac3H11_3124 are separated by 95 nucleotides Ac3H11_3124 and Ac3H11_3125 overlap by 4 nucleotides Ac3H11_3125 and Ac3H11_3126 are separated by 141 nucleotides
Ac3H11_3122 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 23,016 to 25,301
_3122
Ac3H11_3123 - 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF), at 25,463 to 26,443
_3123
Ac3H11_3124 - hypothetical protein, at 26,539 to 26,790
_3124
Ac3H11_3125 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 26,787 to 27,029
_3125
Ac3H11_3126 - Glutamate--cysteine ligase (EC 6.3.2.2), at 27,171 to 28,697
_3126
Position (kb) 25
26
27 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 24.473 kb on - strand, within Ac3H11_3122 at 24.473 kb on - strand, within Ac3H11_3122 at 24.563 kb on - strand, within Ac3H11_3122 at 24.635 kb on - strand, within Ac3H11_3122 at 24.635 kb on - strand, within Ac3H11_3122 at 24.772 kb on + strand, within Ac3H11_3122 at 24.772 kb on + strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.773 kb on - strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.829 kb on + strand, within Ac3H11_3122 at 24.830 kb on - strand, within Ac3H11_3122 at 24.830 kb on - strand, within Ac3H11_3122 at 24.988 kb on + strand, within Ac3H11_3122 at 24.988 kb on + strand, within Ac3H11_3122 at 24.989 kb on - strand, within Ac3H11_3122 at 25.336 kb on - strand at 26.653 kb on + strand, within Ac3H11_3124 at 26.653 kb on + strand, within Ac3H11_3124 at 26.653 kb on + strand, within Ac3H11_3124 at 26.749 kb on + strand, within Ac3H11_3124 at 26.750 kb on - strand, within Ac3H11_3124 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.991 kb on + strand, within Ac3H11_3125 at 27.019 kb on + strand at 27.107 kb on + strand at 27.107 kb on + strand at 27.107 kb on + strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 24,473 - Ac3H11_3122 0.64 +1.6 24,473 - Ac3H11_3122 0.64 -0.4 24,563 - Ac3H11_3122 0.68 -0.1 24,635 - Ac3H11_3122 0.71 +0.1 24,635 - Ac3H11_3122 0.71 +0.9 24,772 + Ac3H11_3122 0.77 +1.8 24,772 + Ac3H11_3122 0.77 -3.1 24,773 - Ac3H11_3122 0.77 -1.3 24,773 - Ac3H11_3122 0.77 +2.1 24,773 - Ac3H11_3122 0.77 -2.1 24,773 - Ac3H11_3122 0.77 -2.7 24,773 - Ac3H11_3122 0.77 +0.9 24,773 - Ac3H11_3122 0.77 +1.6 24,829 + Ac3H11_3122 0.79 -2.2 24,829 + Ac3H11_3122 0.79 -2.2 24,829 + Ac3H11_3122 0.79 -1.5 24,829 + Ac3H11_3122 0.79 -1.2 24,829 + Ac3H11_3122 0.79 -0.7 24,829 + Ac3H11_3122 0.79 -3.2 24,829 + Ac3H11_3122 0.79 -1.2 24,830 - Ac3H11_3122 0.79 -1.2 24,830 - Ac3H11_3122 0.79 +1.1 24,988 + Ac3H11_3122 0.86 -1.2 24,988 + Ac3H11_3122 0.86 +1.4 24,989 - Ac3H11_3122 0.86 -2.4 25,336 - -1.3 26,653 + Ac3H11_3124 0.45 +0.6 26,653 + Ac3H11_3124 0.45 +2.4 26,653 + Ac3H11_3124 0.45 +0.5 26,749 + Ac3H11_3124 0.83 +3.2 26,750 - Ac3H11_3124 0.84 +1.1 26,962 + Ac3H11_3125 0.72 +0.5 26,962 + Ac3H11_3125 0.72 -0.2 26,962 + Ac3H11_3125 0.72 +0.8 26,962 + Ac3H11_3125 0.72 +0.6 26,962 + Ac3H11_3125 0.72 +0.9 26,963 - Ac3H11_3125 0.72 +0.6 26,963 - Ac3H11_3125 0.72 +1.7 26,963 - Ac3H11_3125 0.72 +2.2 26,963 - Ac3H11_3125 0.72 +1.3 26,963 - Ac3H11_3125 0.72 -0.0 26,991 + Ac3H11_3125 0.84 +1.6 27,019 + -1.4 27,107 + -0.7 27,107 + -2.7 27,107 + +0.1 27,108 - +0.1 27,108 - -3.1 27,108 - +1.5 27,108 - +1.7 27,123 + +2.2 27,123 + -0.3 27,123 + -1.0 27,123 + -0.7 27,123 + +0.6 27,123 + +2.4 27,123 + -2.5 27,124 - +0.1 27,124 - +1.0 27,124 - -3.1 27,124 - +1.1 27,124 - +1.3 27,124 - +2.0 27,196 + -0.2 27,196 + -2.6 27,196 + -1.5 27,196 + -3.7 27,197 - -2.2 27,197 - -3.3 27,197 - +1.6 27,197 - -2.4 27,197 - -1.6 27,197 - -0.2 27,197 - -1.1 27,197 - +1.7 27,197 - +2.3 27,197 - -0.7 27,197 - -0.2 27,197 - -3.2 27,197 - +0.4 27,197 - -3.7 27,283 + -1.9 27,283 + -4.1 27,283 + +2.4 27,283 + -2.6
Or see this region's nucleotide sequence