Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_309

Experiment: Cisplatin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_308 and Ac3H11_309 are separated by 207 nucleotidesAc3H11_309 and Ac3H11_310 are separated by 42 nucleotides Ac3H11_308 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 129,028 to 130,491 _308 Ac3H11_309 - hypothetical protein, at 130,699 to 131,031 _309 Ac3H11_310 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 131,074 to 132,654 _310 Position (kb) 130 131 132Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 130.489 kb on + strandat 130.489 kb on + strandat 130.489 kb on + strandat 130.490 kb on - strandat 130.490 kb on - strandat 130.606 kb on + strandat 130.606 kb on + strandat 130.606 kb on + strandat 130.606 kb on + strandat 130.606 kb on + strandat 130.606 kb on + strandat 130.607 kb on - strandat 130.607 kb on - strandat 130.607 kb on - strandat 130.607 kb on - strandat 130.607 kb on - strandat 130.607 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml
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130,489 + +0.4
130,489 + -3.1
130,489 + -2.3
130,490 - +1.4
130,490 - +0.5
130,606 + +1.6
130,606 + -1.7
130,606 + +2.1
130,606 + -1.7
130,606 + +2.6
130,606 + -1.4
130,607 - +2.9
130,607 - +0.2
130,607 - +3.8
130,607 - -1.8
130,607 - +0.4
130,607 - -0.6

Or see this region's nucleotide sequence