Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3013 and Ac3H11_3014 overlap by 4 nucleotides Ac3H11_3014 and Ac3H11_3015 are separated by 20 nucleotides Ac3H11_3015 and Ac3H11_3016 are separated by 526 nucleotides
Ac3H11_3013 - DinB family protein, at 35,215 to 35,700
_3013
Ac3H11_3014 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18), at 35,697 to 36,482
_3014
Ac3H11_3015 - Probable transmembrane protein, at 36,503 to 37,228
_3015
Ac3H11_3016 - Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4), at 37,755 to 39,782
_3016
Position (kb) 36
37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.671 kb on + strand at 35.672 kb on - strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.496 kb on - strand at 36.496 kb on - strand at 36.496 kb on - strand at 36.556 kb on + strand at 36.556 kb on + strand at 36.556 kb on + strand at 36.677 kb on + strand, within Ac3H11_3015 at 37.086 kb on - strand, within Ac3H11_3015 at 37.263 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.288 kb on - strand at 37.337 kb on + strand at 37.399 kb on + strand at 37.399 kb on + strand at 37.400 kb on - strand at 37.400 kb on - strand at 37.719 kb on + strand at 37.719 kb on + strand at 37.723 kb on + strand at 37.723 kb on + strand at 37.723 kb on + strand at 37.741 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 35,527 + Ac3H11_3013 0.64 +0.9 35,527 + Ac3H11_3013 0.64 +2.4 35,527 + Ac3H11_3013 0.64 -1.8 35,527 + Ac3H11_3013 0.64 +0.1 35,671 + -0.3 35,672 - +1.7 36,495 + -0.1 36,495 + +0.9 36,495 + +1.6 36,495 + -2.8 36,495 + +0.7 36,495 + -2.2 36,495 + -0.7 36,496 - +1.5 36,496 - +1.4 36,496 - +1.0 36,556 + +0.9 36,556 + -0.9 36,556 + +1.6 36,677 + Ac3H11_3015 0.24 +1.2 37,086 - Ac3H11_3015 0.80 +1.3 37,263 + -0.2 37,287 + +0.1 37,287 + -1.5 37,287 + +0.7 37,287 + +0.9 37,287 + +0.5 37,287 + -0.1 37,287 + +1.5 37,287 + -1.6 37,287 + -2.6 37,287 + +1.4 37,288 - +2.4 37,337 + -2.3 37,399 + -0.4 37,399 + -2.0 37,400 - +1.9 37,400 - +2.0 37,719 + +0.1 37,719 + +1.6 37,723 + +1.7 37,723 + -0.4 37,723 + +1.4 37,741 - +2.3
Or see this region's nucleotide sequence