Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2857 and Ac3H11_2858 are separated by 132 nucleotides Ac3H11_2858 and Ac3H11_2859 are separated by 25 nucleotides Ac3H11_2859 and Ac3H11_2860 are separated by 37 nucleotides Ac3H11_2860 and Ac3H11_2861 are separated by 117 nucleotides
Ac3H11_2857 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 1,163,373 to 1,164,848
_2857
Ac3H11_2858 - Probable transmembrane protein, at 1,164,981 to 1,165,601
_2858
Ac3H11_2859 - UPF0125 protein yfjF, at 1,165,627 to 1,165,974
_2859
Ac3H11_2860 - Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W, at 1,166,012 to 1,166,452
_2860
Ac3H11_2861 - tmRNA-binding protein SmpB, at 1,166,570 to 1,167,043
_2861
Position (kb) 1165
1166 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1164.740 kb on + strand at 1164.873 kb on + strand at 1164.873 kb on + strand at 1164.873 kb on + strand at 1164.873 kb on + strand at 1164.874 kb on - strand at 1164.874 kb on - strand at 1165.726 kb on + strand, within Ac3H11_2859 at 1165.726 kb on + strand, within Ac3H11_2859 at 1165.726 kb on + strand, within Ac3H11_2859 at 1165.726 kb on + strand, within Ac3H11_2859 at 1165.727 kb on - strand, within Ac3H11_2859 at 1165.742 kb on + strand, within Ac3H11_2859 at 1165.742 kb on + strand, within Ac3H11_2859 at 1165.742 kb on + strand, within Ac3H11_2859 at 1165.743 kb on - strand, within Ac3H11_2859 at 1165.743 kb on - strand, within Ac3H11_2859 at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.019 kb on + strand at 1166.020 kb on - strand at 1166.020 kb on - strand at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.121 kb on + strand, within Ac3H11_2860 at 1166.122 kb on - strand, within Ac3H11_2860 at 1166.122 kb on - strand, within Ac3H11_2860 at 1166.122 kb on - strand, within Ac3H11_2860 at 1166.122 kb on - strand, within Ac3H11_2860 at 1166.122 kb on - strand, within Ac3H11_2860 at 1166.419 kb on - strand at 1166.496 kb on - strand at 1166.496 kb on - strand at 1166.526 kb on + strand at 1166.526 kb on + strand at 1166.526 kb on + strand at 1166.526 kb on + strand at 1166.526 kb on + strand at 1166.527 kb on - strand at 1166.527 kb on - strand at 1166.539 kb on + strand at 1166.539 kb on + strand at 1166.539 kb on + strand at 1166.540 kb on - strand at 1166.540 kb on - strand at 1166.540 kb on - strand at 1166.563 kb on - strand at 1166.624 kb on + strand, within Ac3H11_2861
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 1,164,740 + -2.4 1,164,873 + +0.3 1,164,873 + +2.8 1,164,873 + -2.5 1,164,873 + -1.9 1,164,874 - +1.3 1,164,874 - -1.4 1,165,726 + Ac3H11_2859 0.28 -1.5 1,165,726 + Ac3H11_2859 0.28 -2.7 1,165,726 + Ac3H11_2859 0.28 -1.1 1,165,726 + Ac3H11_2859 0.28 -0.5 1,165,727 - Ac3H11_2859 0.29 -0.0 1,165,742 + Ac3H11_2859 0.33 -2.1 1,165,742 + Ac3H11_2859 0.33 -1.8 1,165,742 + Ac3H11_2859 0.33 -1.1 1,165,743 - Ac3H11_2859 0.33 -0.3 1,165,743 - Ac3H11_2859 0.33 +0.5 1,166,019 + +2.2 1,166,019 + +3.0 1,166,019 + -1.9 1,166,019 + +0.5 1,166,019 + -1.6 1,166,019 + -2.7 1,166,019 + -0.9 1,166,019 + +0.2 1,166,020 - -0.0 1,166,020 - +0.3 1,166,121 + Ac3H11_2860 0.25 -1.3 1,166,121 + Ac3H11_2860 0.25 -0.1 1,166,121 + Ac3H11_2860 0.25 -0.3 1,166,121 + Ac3H11_2860 0.25 -1.5 1,166,121 + Ac3H11_2860 0.25 -0.4 1,166,121 + Ac3H11_2860 0.25 -1.2 1,166,122 - Ac3H11_2860 0.25 +1.3 1,166,122 - Ac3H11_2860 0.25 +2.1 1,166,122 - Ac3H11_2860 0.25 +0.9 1,166,122 - Ac3H11_2860 0.25 -0.9 1,166,122 - Ac3H11_2860 0.25 -2.3 1,166,419 - -1.9 1,166,496 - -2.2 1,166,496 - -3.1 1,166,526 + -2.1 1,166,526 + +2.3 1,166,526 + +0.1 1,166,526 + -0.6 1,166,526 + +2.2 1,166,527 - -1.8 1,166,527 - -2.4 1,166,539 + +0.1 1,166,539 + -1.1 1,166,539 + +0.0 1,166,540 - -1.8 1,166,540 - +1.3 1,166,540 - -2.7 1,166,563 - -0.8 1,166,624 + Ac3H11_2861 0.11 -1.6
Or see this region's nucleotide sequence