Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2699 and Ac3H11_2700 are separated by 15 nucleotides Ac3H11_2700 and Ac3H11_2701 are separated by 481 nucleotides
Ac3H11_2699 - Transcriptional regulator, MarR family, at 994,908 to 996,443
_2699
Ac3H11_2700 - FIG00575888: hypothetical protein, at 996,459 to 997,400
_2700
Ac3H11_2701 - FIG002188: hypothetical protein, at 997,882 to 998,817
_2701
Position (kb) 996
997
998 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699 at 995.958 kb on + strand, within Ac3H11_2699 at 996.273 kb on - strand, within Ac3H11_2699 at 996.273 kb on - strand, within Ac3H11_2699 at 996.276 kb on - strand, within Ac3H11_2699 at 996.276 kb on - strand, within Ac3H11_2699 at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.527 kb on + strand at 996.528 kb on - strand at 996.583 kb on + strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.603 kb on - strand, within Ac3H11_2700 at 996.632 kb on + strand, within Ac3H11_2700 at 996.633 kb on - strand, within Ac3H11_2700 at 996.872 kb on - strand, within Ac3H11_2700 at 996.960 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.015 kb on + strand, within Ac3H11_2700 at 997.312 kb on + strand at 997.313 kb on - strand at 997.327 kb on - strand at 997.509 kb on + strand at 997.510 kb on - strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.638 kb on - strand at 997.638 kb on - strand at 997.680 kb on + strand at 997.680 kb on + strand at 997.861 kb on + strand at 997.861 kb on + strand at 997.862 kb on - strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.879 kb on - strand at 997.883 kb on + strand at 997.883 kb on + strand at 997.884 kb on - strand at 997.907 kb on - strand at 997.992 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.288 kb on + strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.300 kb on + strand, within Ac3H11_2701 at 998.301 kb on - strand, within Ac3H11_2701 at 998.309 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.391 kb on - strand, within Ac3H11_2701
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 995,484 + Ac3H11_2699 0.38 -2.5 995,484 + Ac3H11_2699 0.38 +2.1 995,484 + Ac3H11_2699 0.38 +1.1 995,484 + Ac3H11_2699 0.38 +0.1 995,484 + Ac3H11_2699 0.38 -1.2 995,485 - Ac3H11_2699 0.38 +5.0 995,485 - Ac3H11_2699 0.38 -1.3 995,958 + Ac3H11_2699 0.68 -2.1 996,273 - Ac3H11_2699 0.89 +1.1 996,273 - Ac3H11_2699 0.89 -2.0 996,276 - Ac3H11_2699 0.89 -2.4 996,276 - Ac3H11_2699 0.89 +2.2 996,439 + +0.6 996,439 + +1.2 996,439 + +1.5 996,439 + +2.0 996,439 + -0.7 996,439 + +2.8 996,439 + +0.7 996,439 + +1.2 996,439 + +1.9 996,439 + +0.3 996,439 + +0.7 996,439 + -0.3 996,440 - +3.8 996,440 - -3.1 996,440 - -1.9 996,440 - -3.3 996,527 + +0.4 996,528 - -1.7 996,583 + Ac3H11_2700 0.13 +1.0 996,584 - Ac3H11_2700 0.13 -2.4 996,584 - Ac3H11_2700 0.13 +0.4 996,584 - Ac3H11_2700 0.13 -0.6 996,584 - Ac3H11_2700 0.13 +2.3 996,603 - Ac3H11_2700 0.15 +0.3 996,632 + Ac3H11_2700 0.18 +0.4 996,633 - Ac3H11_2700 0.18 +4.2 996,872 - Ac3H11_2700 0.44 +1.2 996,960 + Ac3H11_2700 0.53 -0.3 997,012 + Ac3H11_2700 0.59 -0.1 997,012 + Ac3H11_2700 0.59 +3.6 997,012 + Ac3H11_2700 0.59 +3.2 997,012 + Ac3H11_2700 0.59 -0.2 997,013 - Ac3H11_2700 0.59 -2.1 997,013 - Ac3H11_2700 0.59 +0.6 997,013 - Ac3H11_2700 0.59 +0.3 997,013 - Ac3H11_2700 0.59 -1.8 997,015 + Ac3H11_2700 0.59 +0.1 997,312 + -3.0 997,313 - +2.1 997,327 - +1.5 997,509 + -0.1 997,510 - -0.1 997,637 + -1.1 997,637 + +0.8 997,637 + -0.7 997,637 + -1.1 997,637 + +1.8 997,637 + -0.7 997,638 - +1.1 997,638 - +0.4 997,680 + +2.7 997,680 + +0.1 997,861 + +0.1 997,861 + -2.1 997,862 - -0.5 997,878 + -1.3 997,878 + -1.2 997,878 + +1.1 997,879 - +1.4 997,883 + -0.8 997,883 + -2.4 997,884 - +0.7 997,907 - +1.6 997,992 - Ac3H11_2701 0.12 -2.1 998,013 - Ac3H11_2701 0.14 +1.3 998,013 - Ac3H11_2701 0.14 -0.8 998,052 - Ac3H11_2701 0.18 +2.8 998,052 - Ac3H11_2701 0.18 +3.1 998,052 - Ac3H11_2701 0.18 -1.2 998,150 + Ac3H11_2701 0.29 +0.8 998,150 + Ac3H11_2701 0.29 -1.1 998,165 + Ac3H11_2701 0.30 +1.6 998,165 + Ac3H11_2701 0.30 +1.9 998,288 + Ac3H11_2701 0.43 +0.9 998,289 - Ac3H11_2701 0.43 -1.2 998,289 - Ac3H11_2701 0.43 -0.1 998,300 + Ac3H11_2701 0.45 +0.9 998,301 - Ac3H11_2701 0.45 +1.6 998,309 + Ac3H11_2701 0.46 -1.4 998,390 + Ac3H11_2701 0.54 +1.3 998,390 + Ac3H11_2701 0.54 -1.1 998,391 - Ac3H11_2701 0.54 +0.4
Or see this region's nucleotide sequence