Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2351 and Ac3H11_2352 are separated by 15 nucleotides Ac3H11_2352 and Ac3H11_2353 are separated by 130 nucleotides Ac3H11_2353 and Ac3H11_2354 are separated by 174 nucleotides
Ac3H11_2351 - Membrane fusion component of tripartite multidrug resistance system, at 607,360 to 608,682
_2351
Ac3H11_2352 - Inner membrane component of tripartite multidrug resistance system, at 608,698 to 610,332
_2352
Ac3H11_2353 - hypothetical protein, at 610,463 to 611,035
_2353
Ac3H11_2354 - Histone acetyltransferase HPA2 and related acetyltransferases, at 611,210 to 611,671
_2354
Position (kb) 608
609
610
611 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 607.705 kb on + strand, within Ac3H11_2351 at 607.706 kb on - strand, within Ac3H11_2351 at 607.706 kb on - strand, within Ac3H11_2351 at 607.706 kb on - strand, within Ac3H11_2351 at 607.706 kb on - strand, within Ac3H11_2351 at 607.706 kb on - strand, within Ac3H11_2351 at 608.020 kb on + strand, within Ac3H11_2351 at 608.020 kb on + strand, within Ac3H11_2351 at 608.228 kb on - strand, within Ac3H11_2351 at 608.245 kb on + strand, within Ac3H11_2351 at 608.245 kb on + strand, within Ac3H11_2351 at 608.246 kb on - strand, within Ac3H11_2351 at 608.541 kb on + strand, within Ac3H11_2351 at 608.680 kb on + strand at 608.681 kb on - strand at 608.822 kb on + strand at 608.823 kb on - strand at 608.823 kb on - strand at 608.823 kb on - strand at 608.823 kb on - strand at 608.946 kb on + strand, within Ac3H11_2352 at 609.173 kb on - strand, within Ac3H11_2352 at 609.295 kb on + strand, within Ac3H11_2352 at 609.295 kb on + strand, within Ac3H11_2352 at 609.296 kb on - strand, within Ac3H11_2352 at 609.296 kb on - strand, within Ac3H11_2352 at 609.346 kb on + strand, within Ac3H11_2352 at 609.346 kb on + strand, within Ac3H11_2352 at 609.347 kb on - strand, within Ac3H11_2352 at 609.347 kb on - strand, within Ac3H11_2352 at 609.622 kb on + strand, within Ac3H11_2352 at 609.623 kb on - strand, within Ac3H11_2352 at 609.682 kb on + strand, within Ac3H11_2352 at 609.682 kb on + strand, within Ac3H11_2352 at 609.682 kb on + strand, within Ac3H11_2352 at 609.683 kb on - strand, within Ac3H11_2352 at 609.683 kb on - strand, within Ac3H11_2352 at 609.915 kb on + strand, within Ac3H11_2352 at 610.359 kb on + strand at 610.359 kb on + strand at 610.464 kb on + strand at 610.464 kb on + strand at 610.464 kb on + strand at 610.464 kb on + strand at 610.465 kb on - strand at 610.465 kb on - strand at 610.465 kb on - strand at 610.465 kb on - strand at 610.465 kb on - strand at 610.833 kb on - strand, within Ac3H11_2353 at 610.833 kb on - strand, within Ac3H11_2353 at 610.833 kb on - strand, within Ac3H11_2353 at 610.833 kb on - strand, within Ac3H11_2353 at 611.003 kb on + strand at 611.004 kb on - strand at 611.004 kb on - strand at 611.120 kb on + strand at 611.226 kb on + strand at 611.283 kb on + strand, within Ac3H11_2354 at 611.283 kb on + strand, within Ac3H11_2354 at 611.283 kb on + strand, within Ac3H11_2354 at 611.283 kb on + strand, within Ac3H11_2354 at 611.284 kb on - strand, within Ac3H11_2354 at 611.284 kb on - strand, within Ac3H11_2354
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 607,705 + Ac3H11_2351 0.26 -1.6 607,706 - Ac3H11_2351 0.26 -2.0 607,706 - Ac3H11_2351 0.26 +0.6 607,706 - Ac3H11_2351 0.26 -3.2 607,706 - Ac3H11_2351 0.26 +0.4 607,706 - Ac3H11_2351 0.26 -0.2 608,020 + Ac3H11_2351 0.50 +1.0 608,020 + Ac3H11_2351 0.50 -2.0 608,228 - Ac3H11_2351 0.66 -2.1 608,245 + Ac3H11_2351 0.67 +1.9 608,245 + Ac3H11_2351 0.67 +1.3 608,246 - Ac3H11_2351 0.67 -2.5 608,541 + Ac3H11_2351 0.89 +0.3 608,680 + +0.6 608,681 - -0.7 608,822 + +0.9 608,823 - -0.0 608,823 - -1.2 608,823 - -2.0 608,823 - +0.0 608,946 + Ac3H11_2352 0.15 -1.4 609,173 - Ac3H11_2352 0.29 +0.2 609,295 + Ac3H11_2352 0.37 -2.5 609,295 + Ac3H11_2352 0.37 -1.2 609,296 - Ac3H11_2352 0.37 +2.1 609,296 - Ac3H11_2352 0.37 +1.3 609,346 + Ac3H11_2352 0.40 -1.4 609,346 + Ac3H11_2352 0.40 -3.7 609,347 - Ac3H11_2352 0.40 +1.2 609,347 - Ac3H11_2352 0.40 -0.6 609,622 + Ac3H11_2352 0.57 -0.1 609,623 - Ac3H11_2352 0.57 +1.2 609,682 + Ac3H11_2352 0.60 -3.2 609,682 + Ac3H11_2352 0.60 -0.6 609,682 + Ac3H11_2352 0.60 +1.7 609,683 - Ac3H11_2352 0.60 -1.9 609,683 - Ac3H11_2352 0.60 -0.0 609,915 + Ac3H11_2352 0.74 +0.4 610,359 + +0.9 610,359 + -2.1 610,464 + +0.9 610,464 + +1.7 610,464 + +1.4 610,464 + -0.2 610,465 - -2.6 610,465 - -0.7 610,465 - +1.9 610,465 - -3.9 610,465 - +0.9 610,833 - Ac3H11_2353 0.65 -0.1 610,833 - Ac3H11_2353 0.65 -1.3 610,833 - Ac3H11_2353 0.65 +0.5 610,833 - Ac3H11_2353 0.65 -2.9 611,003 + +1.2 611,004 - -0.0 611,004 - +1.8 611,120 + -0.6 611,226 + -0.5 611,283 + Ac3H11_2354 0.16 -2.7 611,283 + Ac3H11_2354 0.16 -0.5 611,283 + Ac3H11_2354 0.16 -0.2 611,283 + Ac3H11_2354 0.16 +1.3 611,284 - Ac3H11_2354 0.16 -0.2 611,284 - Ac3H11_2354 0.16 -1.0
Or see this region's nucleotide sequence