Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1763

Experiment: Cisplatin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1762 and Ac3H11_1763 are separated by 85 nucleotidesAc3H11_1763 and Ac3H11_1764 are separated by 23 nucleotides Ac3H11_1762 - Uncharacterized protein conserved in bacteria, at 373,241 to 374,986 _1762 Ac3H11_1763 - Adenylate cyclase (EC 4.6.1.1), at 375,072 to 377,384 _1763 Ac3H11_1764 - Selenophosphate-dependent tRNA 2-selenouridine synthase, at 377,408 to 378,553 _1764 Position (kb) 375 376 377 378Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 374.165 kb on + strand, within Ac3H11_1762at 374.165 kb on + strand, within Ac3H11_1762at 374.166 kb on - strand, within Ac3H11_1762at 374.267 kb on + strand, within Ac3H11_1762at 374.267 kb on + strand, within Ac3H11_1762at 374.270 kb on + strand, within Ac3H11_1762at 374.270 kb on + strand, within Ac3H11_1762at 374.270 kb on + strand, within Ac3H11_1762at 374.271 kb on - strand, within Ac3H11_1762at 374.271 kb on - strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.549 kb on + strand, within Ac3H11_1762at 374.550 kb on - strand, within Ac3H11_1762at 374.550 kb on - strand, within Ac3H11_1762at 374.550 kb on - strand, within Ac3H11_1762at 374.550 kb on - strand, within Ac3H11_1762at 374.841 kb on - strandat 374.841 kb on - strandat 375.214 kb on + strandat 375.214 kb on + strandat 375.592 kb on - strand, within Ac3H11_1763at 375.592 kb on - strand, within Ac3H11_1763at 375.754 kb on - strand, within Ac3H11_1763at 375.783 kb on + strand, within Ac3H11_1763at 375.783 kb on + strand, within Ac3H11_1763at 375.783 kb on + strand, within Ac3H11_1763at 375.783 kb on + strand, within Ac3H11_1763at 375.784 kb on - strand, within Ac3H11_1763at 375.784 kb on - strand, within Ac3H11_1763at 375.784 kb on - strand, within Ac3H11_1763at 375.784 kb on - strand, within Ac3H11_1763at 375.784 kb on - strand, within Ac3H11_1763at 375.789 kb on + strand, within Ac3H11_1763at 375.789 kb on + strand, within Ac3H11_1763at 375.790 kb on - strand, within Ac3H11_1763at 375.790 kb on - strand, within Ac3H11_1763at 375.790 kb on - strand, within Ac3H11_1763at 375.790 kb on - strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.840 kb on + strand, within Ac3H11_1763at 375.841 kb on - strand, within Ac3H11_1763at 375.841 kb on - strand, within Ac3H11_1763at 375.841 kb on - strand, within Ac3H11_1763at 375.841 kb on - strand, within Ac3H11_1763at 377.383 kb on - strandat 377.383 kb on - strandat 377.383 kb on - strandat 377.383 kb on - strandat 377.541 kb on + strand, within Ac3H11_1764at 377.541 kb on + strand, within Ac3H11_1764at 377.542 kb on - strand, within Ac3H11_1764at 377.547 kb on + strand, within Ac3H11_1764at 377.547 kb on + strand, within Ac3H11_1764at 377.547 kb on + strand, within Ac3H11_1764at 377.547 kb on + strand, within Ac3H11_1764at 377.559 kb on + strand, within Ac3H11_1764at 377.559 kb on + strand, within Ac3H11_1764at 377.559 kb on + strand, within Ac3H11_1764at 377.560 kb on - strand, within Ac3H11_1764at 377.560 kb on - strand, within Ac3H11_1764at 377.560 kb on - strand, within Ac3H11_1764at 377.560 kb on - strand, within Ac3H11_1764at 377.562 kb on + strand, within Ac3H11_1764at 377.562 kb on + strand, within Ac3H11_1764at 377.562 kb on + strand, within Ac3H11_1764at 377.563 kb on - strand, within Ac3H11_1764at 377.563 kb on - strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.787 kb on + strand, within Ac3H11_1764at 377.788 kb on - strand, within Ac3H11_1764at 377.788 kb on - strand, within Ac3H11_1764at 377.788 kb on - strand, within Ac3H11_1764at 377.788 kb on - strandat 378.183 kb on + strand, within Ac3H11_1764at 378.184 kb on - strand, within Ac3H11_1764at 378.204 kb on + strand, within Ac3H11_1764at 378.273 kb on + strand, within Ac3H11_1764at 378.273 kb on + strand, within Ac3H11_1764

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Per-strain Table

Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml
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374,165 + Ac3H11_1762 0.53 +2.4
374,165 + Ac3H11_1762 0.53 +0.0
374,166 - Ac3H11_1762 0.53 +3.0
374,267 + Ac3H11_1762 0.59 -0.4
374,267 + Ac3H11_1762 0.59 -2.3
374,270 + Ac3H11_1762 0.59 +0.6
374,270 + Ac3H11_1762 0.59 -0.5
374,270 + Ac3H11_1762 0.59 -2.3
374,271 - Ac3H11_1762 0.59 +0.9
374,271 - Ac3H11_1762 0.59 +1.1
374,549 + Ac3H11_1762 0.75 +1.0
374,549 + Ac3H11_1762 0.75 +0.2
374,549 + Ac3H11_1762 0.75 -0.9
374,549 + Ac3H11_1762 0.75 -1.9
374,549 + Ac3H11_1762 0.75 +0.6
374,549 + Ac3H11_1762 0.75 +0.1
374,550 - Ac3H11_1762 0.75 +0.8
374,550 - Ac3H11_1762 0.75 -0.1
374,550 - Ac3H11_1762 0.75 +1.6
374,550 - Ac3H11_1762 0.75 +0.4
374,841 - -2.1
374,841 - +0.0
375,214 + +1.6
375,214 + -0.2
375,592 - Ac3H11_1763 0.22 +1.4
375,592 - Ac3H11_1763 0.22 -0.3
375,754 - Ac3H11_1763 0.29 -0.7
375,783 + Ac3H11_1763 0.31 -0.0
375,783 + Ac3H11_1763 0.31 -0.1
375,783 + Ac3H11_1763 0.31 -2.6
375,783 + Ac3H11_1763 0.31 +1.6
375,784 - Ac3H11_1763 0.31 -1.8
375,784 - Ac3H11_1763 0.31 +1.0
375,784 - Ac3H11_1763 0.31 -0.8
375,784 - Ac3H11_1763 0.31 -2.2
375,784 - Ac3H11_1763 0.31 +1.4
375,789 + Ac3H11_1763 0.31 -0.7
375,789 + Ac3H11_1763 0.31 +0.8
375,790 - Ac3H11_1763 0.31 -2.3
375,790 - Ac3H11_1763 0.31 +1.2
375,790 - Ac3H11_1763 0.31 -2.0
375,790 - Ac3H11_1763 0.31 +0.6
375,840 + Ac3H11_1763 0.33 -1.4
375,840 + Ac3H11_1763 0.33 -1.2
375,840 + Ac3H11_1763 0.33 +0.0
375,840 + Ac3H11_1763 0.33 -2.7
375,840 + Ac3H11_1763 0.33 +1.1
375,840 + Ac3H11_1763 0.33 -2.3
375,841 - Ac3H11_1763 0.33 +0.0
375,841 - Ac3H11_1763 0.33 -2.5
375,841 - Ac3H11_1763 0.33 +1.1
375,841 - Ac3H11_1763 0.33 +0.4
377,383 - +1.0
377,383 - -1.5
377,383 - -0.6
377,383 - +0.6
377,541 + Ac3H11_1764 0.12 -0.8
377,541 + Ac3H11_1764 0.12 -2.2
377,542 - Ac3H11_1764 0.12 +3.1
377,547 + Ac3H11_1764 0.12 -3.4
377,547 + Ac3H11_1764 0.12 -1.1
377,547 + Ac3H11_1764 0.12 +2.8
377,547 + Ac3H11_1764 0.12 +0.2
377,559 + Ac3H11_1764 0.13 +2.0
377,559 + Ac3H11_1764 0.13 +1.1
377,559 + Ac3H11_1764 0.13 -2.0
377,560 - Ac3H11_1764 0.13 +0.6
377,560 - Ac3H11_1764 0.13 +1.3
377,560 - Ac3H11_1764 0.13 +0.0
377,560 - Ac3H11_1764 0.13 -0.2
377,562 + Ac3H11_1764 0.13 +2.9
377,562 + Ac3H11_1764 0.13 -1.3
377,562 + Ac3H11_1764 0.13 -1.0
377,563 - Ac3H11_1764 0.14 +1.0
377,563 - Ac3H11_1764 0.14 +1.1
377,787 + Ac3H11_1764 0.33 +0.7
377,787 + Ac3H11_1764 0.33 -2.2
377,787 + Ac3H11_1764 0.33 +0.3
377,787 + Ac3H11_1764 0.33 +1.1
377,787 + Ac3H11_1764 0.33 +0.3
377,787 + Ac3H11_1764 0.33 +0.2
377,788 - Ac3H11_1764 0.33 -0.9
377,788 - Ac3H11_1764 0.33 +0.5
377,788 - Ac3H11_1764 0.33 +0.4
377,788 - +0.0
378,183 + Ac3H11_1764 0.68 -2.3
378,184 - Ac3H11_1764 0.68 -1.0
378,204 + Ac3H11_1764 0.69 +1.1
378,273 + Ac3H11_1764 0.75 -2.5
378,273 + Ac3H11_1764 0.75 +0.4

Or see this region's nucleotide sequence