Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28475

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
6,202,739	+		AO353_28465	0.79	+0.1
6,202,739	+		AO353_28465	0.79	+0.2
6,202,784	+		AO353_28465	0.83	-0.3
6,202,784	+		AO353_28465	0.83	-0.3
6,202,784	+		AO353_28465	0.83	+0.4
6,202,784	+		AO353_28465	0.83	-0.6
6,202,784	+		AO353_28465	0.83	+0.8
6,202,784	+		AO353_28465	0.83	+0.6
6,202,785	-		AO353_28465	0.83	+1.1
6,202,785	-		AO353_28465	0.83	+2.1
6,202,785	-		AO353_28465	0.83	+0.6
6,202,785	-		AO353_28465	0.83	-0.1
6,202,785	-		AO353_28465	0.83	-1.0
6,202,870	+				-0.3
6,202,870	+				-1.5
6,202,871	-				-1.7
6,202,871	-				-0.9
6,202,871	-				-0.6
6,202,906	+				+0.7
6,202,998	+				+0.5
6,202,998	+				+0.5
6,202,998	+				-0.2
6,202,999	-				+0.5
6,203,046	+				-0.7
6,203,046	+				-0.0
6,203,046	+				+2.4
6,203,046	+				-1.5
6,203,047	-				+0.9
6,203,047	-				-0.4
6,203,047	-				-0.7
6,203,076	+				-1.2
6,203,080	+				+1.4
6,203,080	+				-1.0
6,203,080	+				+0.6
6,203,080	+				+0.3
6,203,080	+				+0.7
6,203,080	+				-0.4
6,203,080	+				-0.5
6,203,080	+				-1.2
6,203,081	-				+0.7
6,203,081	-				+0.5
6,203,081	-				-0.1
6,203,081	-				-0.2
6,203,081	-				-0.7
6,203,081	-				-2.9
6,203,188	+		AO353_28470	0.30	-0.1
6,203,210	+		AO353_28470	0.35	-1.2
6,203,210	+		AO353_28470	0.35	+2.1
6,203,211	-		AO353_28470	0.35	-0.5
6,203,211	-		AO353_28470	0.35	-0.1
6,203,211	-		AO353_28470	0.35	+1.1
6,203,241	+		AO353_28470	0.43	-0.4
6,203,270	+		AO353_28470	0.50	+0.1
6,203,270	+		AO353_28470	0.50	-0.9
6,203,270	+		AO353_28470	0.50	+1.1
6,203,270	+		AO353_28470	0.50	+0.1
6,203,270	+		AO353_28470	0.50	-0.7
6,203,270	+		AO353_28470	0.50	-1.3
6,203,270	+		AO353_28470	0.50	-0.6
6,203,270	+		AO353_28470	0.50	+0.1
6,203,270	+		AO353_28470	0.50	+0.4
6,203,271	-		AO353_28470	0.50	-1.5
6,203,271	-		AO353_28470	0.50	-1.0
6,203,271	-		AO353_28470	0.50	+0.1
6,203,271	-		AO353_28470	0.50	+0.6
6,203,271	-		AO353_28470	0.50	-1.0
6,203,271	-		AO353_28470	0.50	-1.6
6,203,271	-		AO353_28470	0.50	+1.7
6,203,271	-		AO353_28470	0.50	-0.2
6,203,271	-		AO353_28470	0.50	-1.0
6,203,271	-		AO353_28470	0.50	+1.1
6,203,271	-		AO353_28470	0.50	-0.3
6,203,271	-		AO353_28470	0.50	+1.7
6,203,271	-		AO353_28470	0.50	+1.1
6,203,271	-		AO353_28470	0.50	-1.1
6,203,271	-		AO353_28470	0.50	+0.7
6,203,459	-				-0.2
6,203,484	+				-1.6
6,203,484	+				+1.8
6,203,484	+				+0.1
6,203,485	-				-0.0
6,203,485	-				-0.7
6,203,485	-				-0.6
6,203,485	-				-0.3
6,203,506	-				-0.6
6,203,506	-				+0.6
6,203,670	+		AO353_28475	0.14	-0.5
6,203,671	-		AO353_28475	0.14	-1.2
6,203,673	+		AO353_28475	0.15	+1.1
6,203,684	+		AO353_28475	0.16	-1.7
6,203,707	+		AO353_28475	0.19	+0.9
6,203,756	-		AO353_28475	0.26	-0.5
6,203,756	-		AO353_28475	0.26	-0.2
6,203,891	-		AO353_28475	0.43	-0.7
6,203,944	+		AO353_28475	0.50	+0.1
6,203,944	+		AO353_28475	0.50	-1.0
6,203,944	+		AO353_28475	0.50	-0.3
6,203,945	-		AO353_28475	0.50	-0.4
6,203,945	-		AO353_28475	0.50	-1.2
6,203,945	-		AO353_28475	0.50	+1.1
6,203,949	+		AO353_28475	0.51	-0.7
6,203,950	-		AO353_28475	0.51	+0.4
6,204,003	+		AO353_28475	0.58	-1.0
6,204,003	+		AO353_28475	0.58	-0.9
6,204,004	-		AO353_28475	0.58	-0.5
6,204,004	-		AO353_28475	0.58	-0.5
6,204,215	+		AO353_28475	0.86	+0.7
6,204,215	+		AO353_28475	0.86	+1.1
6,204,363	+				-0.2
6,204,363	+				-1.0
6,204,364	-				-0.8
6,204,364	-				-0.3
6,204,392	+				-0.7
6,204,392	+				+0.7
6,204,392	+				+1.4
6,204,392	+				-0.0
6,204,392	+				+0.7
6,204,392	+				-0.5
6,204,393	-				+0.1
6,204,393	-				+0.4
6,204,409	-				+0.8
6,204,439	-				+0.1
6,204,439	-				-0.5
6,204,496	-				-2.0
6,204,496	-				+1.1
6,204,507	-				-1.1
6,204,521	+				-1.1
6,204,521	+				-0.4
6,204,521	+				-0.3
6,204,522	-				-0.2
6,204,522	-				+0.4
6,204,522	-				+0.8
6,204,522	-				+0.0
6,204,524	+				-1.1
6,204,524	+				+0.1
6,204,524	+				-1.1
6,204,524	+				-1.5
6,204,524	+				-0.1
6,204,525	-				-0.2
6,204,591	+				-1.2
6,204,592	-				+0.1
6,204,602	+				-0.2
6,204,602	+				+1.7
6,204,602	+				-0.5
6,204,602	+				-0.9
6,204,602	+				+0.7
6,204,602	+				-0.9
6,204,602	+				-0.1
6,204,602	+				-0.3
6,204,602	+				-0.4
6,204,603	-				+0.4
6,204,603	-				-0.2
6,204,603	-				+0.4
6,204,603	-				+1.1
6,204,603	-				+1.7
6,204,603	-				+1.4
6,204,678	+				-0.2
6,204,678	+				+0.4
6,204,678	+				-0.4
6,204,678	+				+0.1
6,204,678	+				+0.1
6,204,679	-				+0.5
6,204,679	-				-1.0
6,204,679	-				-0.9
6,204,679	-				+0.7
6,204,679	-				+0.1
6,204,679	-				+1.0
6,204,943	+		AO353_28480	0.23	-0.5
6,204,944	-		AO353_28480	0.23	+1.1
6,205,046	+		AO353_28480	0.29	-0.5
6,205,046	+		AO353_28480	0.29	-1.3
6,205,047	-		AO353_28480	0.29	-0.9
6,205,136	+		AO353_28480	0.35	-1.5
6,205,136	+		AO353_28480	0.35	+0.8
6,205,136	+		AO353_28480	0.35	-1.5
6,205,137	-		AO353_28480	0.35	-1.7
6,205,137	-		AO353_28480	0.35	-1.2
6,205,137	-		AO353_28480	0.35	+0.7
6,205,137	-		AO353_28480	0.35	-1.4
6,205,190	+		AO353_28480	0.38	+1.1
6,205,191	-		AO353_28480	0.38	-0.2
6,205,230	+		AO353_28480	0.41	-0.0
6,205,230	+		AO353_28480	0.41	-0.5
6,205,230	+		AO353_28480	0.41	+0.7
6,205,231	-		AO353_28480	0.41	-2.1
6,205,231	-		AO353_28480	0.41	+0.3
6,205,273	+		AO353_28480	0.43	-0.3
6,205,273	+		AO353_28480	0.43	+1.6
6,205,273	+		AO353_28480	0.43	+1.1
6,205,273	+		AO353_28480	0.43	+1.1
6,205,273	+		AO353_28480	0.43	+0.1
6,205,273	+		AO353_28480	0.43	+0.1
6,205,273	+		AO353_28480	0.43	-0.3
6,205,273	+		AO353_28480	0.43	-0.3
6,205,273	+		AO353_28480	0.43	+1.1
6,205,273	+		AO353_28480	0.43	-0.4
6,205,274	-		AO353_28480	0.43	-1.1
6,205,274	-		AO353_28480	0.43	-1.7
6,205,274	-		AO353_28480	0.43	+0.2
6,205,274	-		AO353_28480	0.43	+0.1
6,205,274	-		AO353_28480	0.43	+0.4
6,205,274	-		AO353_28480	0.43	+0.2
6,205,274	-		AO353_28480	0.43	-0.9
6,205,274	-		AO353_28480	0.43	+0.1
6,205,274	-		AO353_28480	0.43	-2.1
6,205,274	-		AO353_28480	0.43	+0.3
6,205,274	-		AO353_28480	0.43	-1.1
6,205,274	-		AO353_28480	0.43	+0.1
6,205,274	-		AO353_28480	0.43	+1.1
6,205,274	-		AO353_28480	0.43	-0.2