Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19600 and AO353_19605 are separated by 11 nucleotides AO353_19605 and AO353_19610 are separated by 533 nucleotides
AO353_19600: AO353_19600 - NAD-dependent DNA ligase, at 4,295,350 to 4,295,982
_19600
AO353_19605: AO353_19605 - hypothetical protein, at 4,295,994 to 4,296,383
_19605
AO353_19610: AO353_19610 - hypothetical protein, at 4,296,917 to 4,297,288
_19610
Position (kb)
4296
4297
4298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.996 kb on - strand at 4295.996 kb on - strand at 4295.996 kb on - strand at 4296.025 kb on + strand at 4296.026 kb on - strand at 4296.026 kb on - strand at 4296.026 kb on - strand at 4296.145 kb on + strand, within AO353_19605 at 4296.145 kb on + strand, within AO353_19605 at 4296.146 kb on - strand, within AO353_19605 at 4296.146 kb on - strand, within AO353_19605 at 4296.447 kb on + strand at 4296.447 kb on + strand at 4296.447 kb on + strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.458 kb on + strand at 4296.478 kb on - strand at 4296.506 kb on + strand at 4296.515 kb on + strand at 4296.516 kb on - strand at 4296.528 kb on + strand at 4296.528 kb on + strand at 4296.538 kb on + strand at 4296.539 kb on - strand at 4296.556 kb on + strand at 4296.556 kb on + strand at 4296.649 kb on - strand at 4296.649 kb on - strand at 4296.665 kb on + strand at 4296.665 kb on + strand at 4296.665 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.776 kb on - strand at 4296.912 kb on + strand at 4297.019 kb on + strand, within AO353_19610 at 4297.019 kb on + strand, within AO353_19610 at 4297.019 kb on + strand, within AO353_19610 at 4297.020 kb on - strand, within AO353_19610 at 4297.020 kb on - strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.027 kb on - strand, within AO353_19610 at 4297.452 kb on + strand at 4297.453 kb on - strand at 4297.453 kb on - strand at 4297.482 kb on + strand at 4297.482 kb on + strand at 4297.483 kb on - strand at 4297.495 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 4,295,971 + +0.5 4,295,971 + -2.0 4,295,971 + +0.4 4,295,971 + +1.7 4,295,971 + -0.9 4,295,971 + +0.3 4,295,972 - -0.1 4,295,972 - +0.2 4,295,972 - +1.0 4,295,972 - +0.9 4,295,995 + +0.7 4,295,995 + -1.3 4,295,995 + +0.8 4,295,995 + -1.1 4,295,996 - -0.3 4,295,996 - -0.2 4,295,996 - +0.6 4,296,025 + +0.8 4,296,026 - -1.0 4,296,026 - -0.1 4,296,026 - +2.4 4,296,145 + AO353_19605 0.39 -0.8 4,296,145 + AO353_19605 0.39 -0.6 4,296,146 - AO353_19605 0.39 +0.4 4,296,146 - AO353_19605 0.39 -0.8 4,296,447 + +0.4 4,296,447 + +0.2 4,296,447 + +0.4 4,296,448 - +0.5 4,296,448 - +0.7 4,296,448 - -0.6 4,296,448 - -0.1 4,296,448 - +0.7 4,296,458 + -0.6 4,296,478 - -0.8 4,296,506 + +0.6 4,296,515 + -0.9 4,296,516 - -0.2 4,296,528 + +0.2 4,296,528 + -1.0 4,296,538 + -1.1 4,296,539 - +0.8 4,296,556 + +0.1 4,296,556 + -0.1 4,296,649 - -2.2 4,296,649 - -0.3 4,296,665 + +0.0 4,296,665 + +0.2 4,296,665 + -1.1 4,296,741 + -0.2 4,296,741 + +0.5 4,296,741 + -0.8 4,296,741 + +0.2 4,296,741 + -0.4 4,296,741 + -0.5 4,296,741 + -0.0 4,296,741 + +0.1 4,296,741 + -0.3 4,296,741 + -0.2 4,296,741 + -0.6 4,296,741 + +0.2 4,296,741 + +1.4 4,296,741 + -0.3 4,296,741 + -0.3 4,296,741 + +0.0 4,296,741 + -2.1 4,296,741 + -0.2 4,296,741 + +0.0 4,296,742 - -0.3 4,296,742 - -1.6 4,296,742 - -0.6 4,296,742 - -0.3 4,296,742 - +0.6 4,296,742 - +0.6 4,296,776 - +0.4 4,296,912 + +0.2 4,297,019 + AO353_19610 0.27 -1.2 4,297,019 + AO353_19610 0.27 -3.0 4,297,019 + AO353_19610 0.27 -0.3 4,297,020 - AO353_19610 0.28 +0.1 4,297,020 - AO353_19610 0.28 -0.8 4,297,026 + AO353_19610 0.29 +0.4 4,297,026 + AO353_19610 0.29 -1.2 4,297,026 + AO353_19610 0.29 -1.3 4,297,027 - AO353_19610 0.30 -0.2 4,297,452 + -0.3 4,297,453 - +0.2 4,297,453 - -1.9 4,297,482 + -0.1 4,297,482 + +0.7 4,297,483 - +0.1 4,297,495 - +0.8
Or see this region's nucleotide sequence