Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3147

Experiment: Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_3146 and Shewana3_3147 are separated by 248 nucleotidesShewana3_3147 and pgi are separated by 20 nucleotides Shewana3_3146: Shewana3_3146 - OmpA/MotB domain-containing protein (RefSeq), at 3,773,981 to 3,775,102 _3146 Shewana3_3147: Shewana3_3147 - transaldolase B (RefSeq), at 3,775,351 to 3,776,307 _3147 Shewana3_3148: pgi - glucose-6-phosphate isomerase (RefSeq), at 3,776,328 to 3,777,965 pgi Position (kb) 3775 3776 3777Strain fitness (log2 ratio) -1 0 1at 3774.965 kb on + strand, within Shewana3_3146at 3775.091 kb on + strandat 3775.142 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (N)
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3,774,965 + Shewana3_3146 0.88 +0.2
3,775,091 + -1.2
3,775,142 + +1.4

Or see this region's nucleotide sequence