Strain Fitness in Shewanella loihica PV-4 around Shew_3829

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,559,561	-				-1.7
4,559,577	-				-0.1
4,559,663	-		Shew_3828	0.12	-0.2
4,559,696	-		Shew_3828	0.16	+0.1
4,559,729	-		Shew_3828	0.20	+0.3
4,559,729	-		Shew_3828	0.20	+1.0
4,559,742	-		Shew_3828	0.22	-0.0
4,559,779	+		Shew_3828	0.26	+1.6
4,559,800	-		Shew_3828	0.29	+0.9
4,559,802	-		Shew_3828	0.29	+0.4
4,559,849	+		Shew_3828	0.35	+1.2
4,559,849	+		Shew_3828	0.35	+1.5
4,559,886	-		Shew_3828	0.39	-0.2
4,559,898	-		Shew_3828	0.40	+0.7
4,559,984	-		Shew_3828	0.51	-0.1
4,560,007	-		Shew_3828	0.54	+0.3
4,560,012	+		Shew_3828	0.54	+0.3
4,560,028	-		Shew_3828	0.56	-0.8
4,560,028	-		Shew_3828	0.56	+1.5
4,560,059	+		Shew_3828	0.60	-1.5
4,560,066	+		Shew_3828	0.61	-1.6
4,560,066	+		Shew_3828	0.61	+0.0
4,560,282	+		Shew_3828	0.87	+0.5
4,560,283	-		Shew_3828	0.87	+0.9
4,560,327	-				+0.7
4,560,327	-				-1.7
4,560,344	-				-1.7
4,560,450	-				+0.0
4,560,463	+				-0.6
4,560,471	-				+1.8
4,560,553	+				+0.5
4,560,588	-		Shew_3829	0.13	-0.5
4,560,611	+		Shew_3829	0.20	-1.0
4,560,611	+		Shew_3829	0.20	-0.6
4,560,632	-		Shew_3829	0.27	-0.1
4,560,743	-		Shew_3829	0.63	+0.4
4,561,121	+		Shew_3830	0.18	+0.7
4,561,172	+		Shew_3830	0.25	-1.8
4,561,180	-		Shew_3830	0.26	+0.7
4,561,180	-		Shew_3830	0.26	+0.4
4,561,252	+		Shew_3830	0.36	-0.2
4,561,284	+		Shew_3830	0.40	+0.4
4,561,354	+		Shew_3830	0.50	+1.0
4,561,460	-		Shew_3830	0.64	+0.3
4,561,519	-		Shew_3830	0.72	+0.8
4,561,592	-		Shew_3830	0.82	+0.5
4,561,615	+		Shew_3830	0.85	+0.1
4,561,617	+		Shew_3830	0.86	+0.4
4,561,617	+		Shew_3830	0.86	-1.1
4,561,623	-		Shew_3830	0.86	+0.1
4,561,625	-		Shew_3830	0.87	+0.6
4,561,625	-		Shew_3830	0.87	+0.1
4,561,625	-		Shew_3830	0.87	+0.6
4,561,625	-		Shew_3830	0.87	+0.3
4,561,629	+		Shew_3830	0.87	+0.4
4,561,629	+		Shew_3830	0.87	-0.5
4,561,637	-		Shew_3830	0.88	+0.1
4,561,637	-		Shew_3830	0.88	+0.7
4,561,637	-		Shew_3830	0.88	-0.1
4,561,647	-		Shew_3830	0.90	+1.3
4,561,723	+				+0.6
4,561,731	-				+3.1
4,561,829	+		Shew_3831	0.81	-0.0
4,561,829	+		Shew_3831	0.81	+0.7
4,561,829	+		Shew_3831	0.81	-0.5
4,561,829	+		Shew_3831	0.81	-0.6
4,561,829	+		Shew_3831	0.81	-0.3
4,561,833	+		Shew_3831	0.84	+0.6
4,561,833	+		Shew_3831	0.84	+0.7
4,561,833	+		Shew_3831	0.84	+1.3
4,561,833	+		Shew_3831	0.84	+0.3
4,561,837	-		Shew_3831	0.88	-1.0
4,561,837	-		Shew_3831	0.88	+0.5
4,561,841	-				+1.3
4,561,841	-				+0.5
4,561,841	-				+0.3