Strain Fitness in Shewanella loihica PV-4 around Shew_3737
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,449,325 | + | Shew_3735 | 0.84 | +0.0 | |
4,449,333 | - | Shew_3735 | 0.84 | +1.1 | |
4,451,187 | + | -0.8 | |||
4,451,457 | + | Shew_3738 | 0.26 | -3.2 | |
4,451,465 | - | Shew_3738 | 0.27 | -3.3 | |
4,451,466 | + | Shew_3738 | 0.27 | -1.3 | |
4,451,466 | + | Shew_3738 | 0.27 | -1.5 | |
4,451,472 | - | Shew_3738 | 0.27 | -4.7 | |
4,451,565 | + | Shew_3738 | 0.35 | -3.6 | |
4,451,588 | + | Shew_3738 | 0.36 | -2.3 | |
4,451,734 | + | Shew_3738 | 0.48 | -0.5 | |
4,451,794 | + | Shew_3738 | 0.52 | -1.6 | |
4,451,794 | + | Shew_3738 | 0.52 | -0.8 | |
4,451,802 | - | Shew_3738 | 0.53 | -2.0 |
Or see this region's nucleotide sequence