Strain Fitness in Shewanella loihica PV-4 around Shew_2754
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,257,168 | - | +0.8 | |||
| 3,257,245 | + | -0.2 | |||
| 3,257,414 | + | -0.2 | |||
| 3,257,671 | + | +0.4 | |||
| 3,257,859 | + | Shew_2754 | 0.22 | +0.2 | |
| 3,257,960 | - | Shew_2754 | 0.28 | +0.3 | |
| 3,258,607 | - | Shew_2754 | 0.70 | -0.6 | |
| 3,258,994 | + | -0.7 | |||
| 3,259,029 | - | +0.5 | |||
| 3,259,034 | - | +0.5 | |||
| 3,259,374 | - | Shew_2755 | 0.17 | -0.8 | |
| 3,259,648 | + | Shew_2755 | 0.37 | -0.3 |
Or see this region's nucleotide sequence