Strain Fitness in Shewanella loihica PV-4 around Shew_2090
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,416,888 | - | Shew_2089 | 0.31 | +0.3 | |
| 2,417,080 | - | Shew_2089 | 0.45 | -0.6 | |
| 2,417,296 | - | Shew_2089 | 0.60 | +0.3 | |
| 2,418,052 | + | Shew_2090 | 0.73 | +0.9 | |
| 2,419,000 | - | thiH | Shew_2091 | 0.69 | -1.0 |
| 2,419,000 | - | thiH | Shew_2091 | 0.69 | +0.1 |
Or see this region's nucleotide sequence