Strain Fitness in Shewanella loihica PV-4 around Shew_2080

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,404,620	-				+0.4
2,404,661	+				-3.2
2,404,661	+				+0.6
2,404,661	+				+2.3
2,404,661	+				-0.6
2,404,661	+				-3.0
2,404,669	-				+0.3
2,404,669	-				-0.4
2,404,669	-				+0.5
2,404,669	-				+0.7
2,404,763	-				+0.4
2,404,822	+				+0.1
2,404,855	+		Shew_2080	0.11	+0.4
2,405,016	+		Shew_2080	0.17	+0.4
2,405,059	-		Shew_2080	0.18	+0.6
2,405,059	-		Shew_2080	0.18	-1.2
2,405,174	-		Shew_2080	0.22	+1.1
2,405,236	-		Shew_2080	0.24	+0.8
2,405,410	+		Shew_2080	0.31	-1.0
2,405,607	+		Shew_2080	0.38	-0.1
2,405,846	+		Shew_2080	0.46	-3.6
2,406,027	-		Shew_2080	0.53	-0.6
2,406,204	-		Shew_2080	0.59	+0.9
2,406,338	+		Shew_2080	0.64	-0.6
2,406,439	-		Shew_2080	0.67	+0.3
2,406,597	-		Shew_2080	0.73	-0.4
2,406,799	-		Shew_2080	0.80	-0.4
2,406,998	+		Shew_2080	0.87	-0.3
2,406,998	+		Shew_2080	0.87	+0.1
2,407,006	-		Shew_2080	0.88	-2.6
2,407,006	-		Shew_2080	0.88	+0.8
2,407,117	-				-2.2
2,407,242	-				+0.4
2,407,351	+				+4.1
2,407,410	-				-0.6
2,407,422	+				+0.2
2,407,487	-				+0.2
2,407,539	-				+0.1
2,407,654	+				-2.4
2,407,662	-				-2.6