Strain Fitness in Shewanella loihica PV-4 around Shew_1933
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,232,310 | - | cls | Shew_1932 | 0.68 | +0.6 |
2,232,885 | + | -0.1 | |||
2,233,249 | - | Shew_1933 | 0.40 | -0.6 | |
2,233,426 | - | Shew_1933 | 0.60 | -4.1 | |
2,234,303 | + | Shew_1934 | 0.66 | +0.7 | |
2,234,311 | - | Shew_1934 | 0.67 | -1.2 | |
2,234,552 | - | +1.1 |
Or see this region's nucleotide sequence