Strain Fitness in Shewanella loihica PV-4 around Shew_1324
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,536,651 | - | Shew_1323 | 0.27 | -3.5 | |
1,537,015 | - | Shew_1323 | 0.59 | -2.3 | |
1,537,572 | - | Shew_1324 | 0.38 | -1.4 | |
1,537,572 | - | Shew_1324 | 0.38 | -3.2 | |
1,537,867 | + | Shew_1325 | 0.26 | -3.0 | |
1,537,880 | - | Shew_1325 | 0.28 | +0.5 | |
1,537,883 | + | Shew_1325 | 0.29 | -1.4 | |
1,537,976 | + | Shew_1325 | 0.45 | -2.4 | |
1,538,063 | + | Shew_1325 | 0.60 | -1.8 | |
1,538,177 | - | Shew_1325 | 0.80 | -0.6 | |
1,538,245 | + | +0.3 | |||
1,538,409 | - | Shew_1326 | 0.15 | -0.1 |
Or see this region's nucleotide sequence