Strain Fitness in Shewanella loihica PV-4 around Shew_1310

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
1,517,542	-		Shew_1309	0.67	+0.4
1,517,542	-		Shew_1309	0.67	-0.6
1,517,552	-		Shew_1309	0.72	-3.1
1,517,569	+		Shew_1309	0.81	+0.0
1,517,570	+		Shew_1309	0.82	+0.4
1,517,578	-		Shew_1309	0.86	+0.3
1,517,579	+		Shew_1309	0.87	-0.1
1,517,579	+		Shew_1309	0.87	+0.9
1,517,579	+		Shew_1309	0.87	-0.1
1,517,579	+		Shew_1309	0.87	+0.8
1,517,579	+		Shew_1309	0.87	+1.9
1,517,579	+		Shew_1309	0.87	-1.4
1,517,580	+		Shew_1309	0.87	+0.9
1,517,586	+				+2.4
1,517,586	+				+0.1
1,517,586	+				-3.2
1,517,587	-				-2.4
1,517,587	-				+1.2
1,517,587	-				-0.2
1,517,587	-				-1.2
1,517,587	-				-0.7
1,517,587	-				-0.8
1,517,587	-				+0.7
1,517,587	-				+0.9
1,517,587	-				-0.3
1,517,588	-				+1.2
1,517,588	-				-0.6
1,517,589	-				-0.3
1,517,591	+				-1.6
1,517,591	+				+1.7
1,517,591	+				+0.8
1,517,591	+				+0.5
1,517,591	+				+0.9
1,517,591	+				+0.2
1,517,591	+				-0.2
1,517,591	+				+0.5
1,517,591	+				-2.1
1,517,591	+				-0.6
1,517,591	+				-1.2
1,517,591	+				-0.1
1,517,591	+				-1.3
1,517,591	+				+1.4
1,517,591	+				-1.6
1,517,591	+				+0.4
1,517,591	+				+0.6
1,517,591	+				-0.5
1,517,591	+				+0.2
1,517,591	+				-1.4
1,517,591	+				-0.4
1,517,594	-				+0.2
1,517,594	-				-0.3
1,517,594	-				-1.0
1,517,599	-				+0.3
1,517,599	-				-2.6
1,517,599	-				+1.3
1,517,599	-				+0.2
1,517,599	-				-0.3
1,517,599	-				+0.2
1,517,599	-				+0.7
1,517,599	-				-0.4
1,517,599	-				-0.4
1,517,599	-				+0.6
1,517,599	-				+1.3
1,517,599	-				+1.0
1,517,599	-				-2.7
1,517,599	-				-1.5
1,517,599	-				-1.4
1,517,599	-				+2.5
1,517,599	-				-2.7
1,517,599	-				-0.5
1,517,599	-				-2.4
1,517,599	-				-1.4
1,517,599	-				+1.2
1,517,599	-				+0.6
1,517,612	+				-0.5
1,517,713	+				-0.8
1,517,722	-				-0.3
1,517,842	+				+1.0
1,517,843	+				-0.4
1,517,850	-				+0.6
1,517,852	+				-1.8
1,517,859	+				-0.4
1,517,861	-				+0.9
1,517,874	+				+0.4
1,517,874	+				-2.3
1,517,875	+				+0.8
1,517,879	+				+1.3
1,517,889	+				+0.2
1,517,896	+				-0.1
1,517,896	+				+0.2
1,517,897	-				+0.7
1,517,900	+				-0.1
1,517,904	+				-1.1
1,517,916	+				-0.4
1,517,916	+				-0.0
1,517,924	-				-0.2
1,517,924	-				+1.2
1,517,924	-				+0.2
1,517,925	+				+0.6
1,517,926	-				-3.0
1,517,933	-				-0.2
1,518,034	+				+0.4
1,518,044	-				-2.4
1,518,057	-				-1.2
1,518,061	+				+0.5
1,518,094	+				+1.0
1,518,102	-				+0.6
1,518,162	+				-0.1
1,518,162	+				-0.3
1,518,162	+				-0.1
1,518,162	+				-0.1
1,518,170	-				+1.6
1,518,170	-				+1.0
1,518,170	-				+0.1
1,518,170	-				-1.4
1,518,170	-				-0.2
1,518,170	-				+0.7
1,518,170	-				+0.1
1,518,170	-				+0.5
1,518,327	+				+1.8
1,518,327	+				+3.2
1,518,335	-				+0.3
1,518,476	-				+1.2
1,518,654	+				-0.4
1,518,786	-		Shew_1310	0.13	+0.7
1,519,325	+		Shew_1310	0.39	+0.8
1,519,333	-		Shew_1310	0.40	+0.6
1,519,453	-		Shew_1310	0.46	+0.8
1,519,826	+		Shew_1310	0.64	+1.7
1,519,874	-		Shew_1310	0.67	-3.9
1,519,993	-		Shew_1310	0.73	+0.1
1,520,178	+		Shew_1310	0.82	+0.1
1,520,306	+		Shew_1310	0.88	+0.8
1,520,314	-		Shew_1310	0.89	-3.2
1,520,314	-		Shew_1310	0.89	+0.3
1,520,652	+				+0.6
1,520,996	-				+0.1
1,521,309	+		Shew_1311	0.19	-3.7
1,521,454	-		Shew_1311	0.23	-2.4