Strain Fitness in Shewanella loihica PV-4 around Shew_1169

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
1,347,568	+		Shew_1168	0.58	-0.4
1,348,081	+		Shew_1168	0.81	-1.3
1,348,173	-		Shew_1168	0.85	-0.3
1,348,422	-				-0.7
1,348,512	-				-0.9
1,348,576	-				+0.0
1,348,688	+				+0.1
1,348,740	+		Shew_1169	0.10	+0.3
1,348,859	+		Shew_1169	0.16	-0.4
1,349,340	+		Shew_1169	0.38	+0.4
1,349,496	+		Shew_1169	0.45	-0.1
1,349,693	+		Shew_1169	0.54	-1.2
1,349,916	+		Shew_1169	0.64	+0.2
1,350,149	-		Shew_1169	0.74	-0.5
1,350,401	-		Shew_1169	0.86	-2.5
1,350,430	+		Shew_1169	0.87	+1.3
1,350,502	+				+0.1
1,350,555	+				-0.5
1,350,647	+				-1.0
1,350,673	-				+1.0
1,350,706	+				-0.3
1,350,714	-				+0.7
1,350,714	-				+0.5
1,350,866	+				-1.0
1,350,902	-				-0.5
1,350,947	-				-0.1
1,351,016	+		Shew_1170	0.12	-0.0
1,351,179	-		Shew_1170	0.19	-0.1
1,351,311	+		Shew_1170	0.24	-0.6
1,351,409	+		Shew_1170	0.28	+0.2
1,351,524	+		Shew_1170	0.32	-2.5
1,351,590	+		Shew_1170	0.35	+1.0
1,351,682	+		Shew_1170	0.39	+0.8