Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5276

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
6,067,541	+				-0.4
6,067,541	+				+0.7
6,067,542	-				-0.7
6,067,542	-				-0.4
6,067,542	-				-0.4
6,067,542	-				+1.2
6,067,542	-				+0.7
6,067,542	-				+1.5
6,067,542	-				-1.2
6,067,563	-				-0.6
6,067,573	+				-0.5
6,067,573	+				+0.2
6,067,573	+				-1.2
6,067,573	+				-0.4
6,067,574	-				-0.1
6,067,574	-				-0.3
6,067,574	-				+0.7
6,067,574	-				+0.9
6,067,576	-				-0.4
6,067,598	+				-0.4
6,067,598	+				+0.5
6,067,598	+				-0.8
6,067,598	+				+0.3
6,067,598	+				+0.6
6,067,598	+				+0.5
6,067,598	+				-0.2
6,067,598	+				+0.9
6,067,598	+				-0.5
6,067,599	-				+0.8
6,067,599	-				+0.1
6,067,599	-				+0.6
6,067,599	-				+0.1
6,067,599	-				+0.3
6,067,599	-				+0.8
6,067,599	-				-1.0
6,067,599	-				-2.7
6,067,599	-				+1.2
6,067,599	-				+0.4
6,067,599	-				-0.6
6,067,599	-				-0.1
6,067,602	+				+0.8
6,067,602	+				-0.0
6,067,602	+				+0.9
6,067,602	+				-1.1
6,067,602	+				-0.0
6,067,602	+				-0.7
6,067,603	-				-0.3
6,067,603	-				-0.4
6,067,603	-				+0.5
6,067,603	-				-0.1
6,067,603	-				-0.6
6,067,661	+				-0.1
6,067,662	-				+0.3
6,067,662	-				+0.1
6,067,662	-				+0.3
6,067,668	+				+0.3
6,067,668	+				+0.0
6,067,668	+				-0.5
6,067,669	-				-0.1
6,067,827	+		Pf6N2E2_5275	0.14	-0.1
6,067,827	+		Pf6N2E2_5275	0.14	-0.2
6,067,827	+		Pf6N2E2_5275	0.14	-0.1
6,067,828	-		Pf6N2E2_5275	0.14	-0.4
6,067,835	+		Pf6N2E2_5275	0.16	+0.2
6,067,835	+		Pf6N2E2_5275	0.16	-0.4
6,067,835	+		Pf6N2E2_5275	0.16	+0.2
6,067,836	-		Pf6N2E2_5275	0.16	+0.3
6,067,836	-		Pf6N2E2_5275	0.16	-0.3
6,067,863	+		Pf6N2E2_5275	0.21	+0.0
6,067,864	-		Pf6N2E2_5275	0.21	+0.3
6,067,864	-		Pf6N2E2_5275	0.21	-0.3
6,068,108	+		Pf6N2E2_5275	0.64	+2.5
6,068,109	-		Pf6N2E2_5275	0.65	+0.5
6,068,109	-		Pf6N2E2_5275	0.65	+1.2
6,068,301	+				+0.4
6,068,308	+				-0.4
6,068,308	+				+0.4
6,068,308	+				+0.9
6,068,308	+				+0.4
6,068,308	+				+0.1
6,068,308	+				-0.0
6,068,308	+				+0.8
6,068,308	+				+0.6
6,068,309	-				-0.1
6,068,309	-				+0.0
6,068,309	-				+0.4
6,068,309	-				+0.1
6,068,309	-				-0.0
6,068,309	-				+0.2
6,068,309	-				+0.0
6,068,321	-				+0.1
6,068,411	+				+0.8
6,068,411	+				+1.4
6,068,411	+				+0.3
6,068,427	+				+0.1
6,068,427	+				+0.4
6,068,452	+				-0.4
6,068,452	+				-0.2
6,068,452	+				+0.8
6,068,493	+				+1.3
6,068,493	+				+0.7
6,068,493	+				+0.5
6,068,494	-				-0.5
6,068,494	-				+0.8
6,068,494	-				+0.3
6,068,536	+				+0.6
6,068,536	+				-0.9
6,068,536	+				-0.1
6,068,536	+				-0.3
6,068,536	+				+0.4
6,068,537	-				+0.3
6,068,928	+		Pf6N2E2_5276	0.42	+0.7
6,068,949	+		Pf6N2E2_5276	0.44	-0.3
6,068,949	+		Pf6N2E2_5276	0.44	+0.0
6,068,949	+		Pf6N2E2_5276	0.44	+0.3
6,068,949	+		Pf6N2E2_5276	0.44	+0.4
6,068,949	+		Pf6N2E2_5276	0.44	-0.3
6,068,949	+		Pf6N2E2_5276	0.44	-1.0
6,068,949	+		Pf6N2E2_5276	0.44	+0.9
6,068,949	+		Pf6N2E2_5276	0.44	-2.6
6,068,949	+		Pf6N2E2_5276	0.44	+0.9
6,068,950	-		Pf6N2E2_5276	0.44	-0.2
6,068,950	-		Pf6N2E2_5276	0.44	-1.6
6,068,950	-		Pf6N2E2_5276	0.44	-0.2
6,068,950	-		Pf6N2E2_5276	0.44	+0.7
6,068,950	-		Pf6N2E2_5276	0.44	+1.1
6,068,950	-		Pf6N2E2_5276	0.44	+0.1
6,068,950	-		Pf6N2E2_5276	0.44	+0.1
6,068,950	-		Pf6N2E2_5276	0.44	+0.8
6,069,001	+		Pf6N2E2_5276	0.49	+0.6
6,069,001	+		Pf6N2E2_5276	0.49	-0.3
6,069,001	+		Pf6N2E2_5276	0.49	-1.0
6,069,001	+		Pf6N2E2_5276	0.49	+0.9
6,069,001	+		Pf6N2E2_5276	0.49	+0.8
6,069,002	-		Pf6N2E2_5276	0.49	+0.4
6,069,002	-		Pf6N2E2_5276	0.49	-0.7
6,069,002	-		Pf6N2E2_5276	0.49	-0.3
6,069,002	-		Pf6N2E2_5276	0.49	+0.7
6,069,002	-		Pf6N2E2_5276	0.49	-0.1
6,069,105	-		Pf6N2E2_5276	0.60	+0.4
6,069,105	-		Pf6N2E2_5276	0.60	+0.7
6,069,482	+				-0.2
6,069,483	-				+0.8
6,069,502	+				-0.6
6,069,502	+				+0.3
6,069,503	-				+0.0
6,069,511	+				+0.9
6,069,511	+				-0.1
6,069,512	-				+0.4
6,069,512	-				+0.9
6,069,512	-				+0.6
6,069,595	+				-0.3
6,069,596	-				-0.2
6,069,596	-				-0.8
6,069,678	+				-0.1
6,069,678	+				-0.4
6,069,678	+				-0.2
6,069,678	+				+0.2
6,069,678	+				-2.2
6,069,678	+				-0.8
6,069,679	-				-0.7
6,069,679	-				-0.9
6,069,679	-				-1.0
6,069,679	-				-3.5
6,069,786	+		Pf6N2E2_5277	0.25	+0.2
6,069,806	+		Pf6N2E2_5277	0.29	+1.4
6,069,807	-		Pf6N2E2_5277	0.29	+0.2
6,069,854	+		Pf6N2E2_5277	0.37	+0.1
6,069,854	+		Pf6N2E2_5277	0.37	-0.9
6,069,854	+		Pf6N2E2_5277	0.37	-0.1
6,069,855	-		Pf6N2E2_5277	0.37	-0.7
6,069,855	-		Pf6N2E2_5277	0.37	-0.2
6,069,855	-		Pf6N2E2_5277	0.37	-2.4
6,069,855	-		Pf6N2E2_5277	0.37	+0.7
6,069,855	-		Pf6N2E2_5277	0.37	-1.8
6,069,855	-		Pf6N2E2_5277	0.37	-1.7
6,069,954	-		Pf6N2E2_5277	0.53	-1.6
6,069,954	-		Pf6N2E2_5277	0.53	-1.1
6,069,954	-		Pf6N2E2_5277	0.53	-0.1
6,069,954	-		Pf6N2E2_5277	0.53	-1.1
6,069,954	-		Pf6N2E2_5277	0.53	+0.2
6,069,954	-		Pf6N2E2_5277	0.53	-1.3
6,069,972	+		Pf6N2E2_5277	0.56	-0.2
6,069,973	-		Pf6N2E2_5277	0.56	-0.2
6,069,973	-		Pf6N2E2_5277	0.56	-0.1
6,070,075	+		Pf6N2E2_5277	0.73	+1.0
6,070,133	+		Pf6N2E2_5277	0.83	+0.8
6,070,260	-				+1.2
6,070,260	-				+0.3
6,070,279	+				+0.5
6,070,279	+				+0.3
6,070,280	-				-0.3
6,070,280	-				+0.4
6,070,294	-				-0.7
6,070,294	-				+0.7
6,070,434	+		Pf6N2E2_5278	0.30	-0.5
6,070,434	+		Pf6N2E2_5278	0.30	-0.2
6,070,434	+		Pf6N2E2_5278	0.30	-0.8
6,070,434	+		Pf6N2E2_5278	0.30	-0.8
6,070,435	-		Pf6N2E2_5278	0.30	-0.4
6,070,435	-		Pf6N2E2_5278	0.30	-0.2
6,070,435	-		Pf6N2E2_5278	0.30	+0.0
6,070,435	-		Pf6N2E2_5278	0.30	-0.0
6,070,435	-		Pf6N2E2_5278	0.30	+0.7
6,070,438	+		Pf6N2E2_5278	0.31	+0.8
6,070,438	+		Pf6N2E2_5278	0.31	-0.5
6,070,438	+		Pf6N2E2_5278	0.31	-0.8
6,070,438	+		Pf6N2E2_5278	0.31	+0.4
6,070,438	+		Pf6N2E2_5278	0.31	-0.7
6,070,438	+		Pf6N2E2_5278	0.31	-0.5
6,070,439	-		Pf6N2E2_5278	0.31	-0.1
6,070,439	-		Pf6N2E2_5278	0.31	+0.8
6,070,439	-		Pf6N2E2_5278	0.31	+0.8