Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4632

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
5,359,986	+		Pf6N2E2_4631	0.47	-1.7
5,360,031	+		Pf6N2E2_4631	0.50	-1.4
5,360,031	+		Pf6N2E2_4631	0.50	+0.1
5,360,031	+		Pf6N2E2_4631	0.50	-0.3
5,360,032	-		Pf6N2E2_4631	0.50	-0.6
5,360,175	+		Pf6N2E2_4631	0.61	-2.4
5,360,176	-		Pf6N2E2_4631	0.61	-0.1
5,360,223	+		Pf6N2E2_4631	0.64	+0.1
5,360,223	+		Pf6N2E2_4631	0.64	-1.8
5,360,224	-		Pf6N2E2_4631	0.64	-0.7
5,360,224	-		Pf6N2E2_4631	0.64	-0.1
5,360,224	-		Pf6N2E2_4631	0.64	-1.1
5,360,224	-		Pf6N2E2_4631	0.64	-1.1
5,360,283	+		Pf6N2E2_4631	0.68	-0.5
5,360,283	+		Pf6N2E2_4631	0.68	-1.1
5,360,284	-		Pf6N2E2_4631	0.68	-1.3
5,360,341	-		Pf6N2E2_4631	0.72	-2.2
5,360,394	+		Pf6N2E2_4631	0.76	-2.8
5,360,583	+		Pf6N2E2_4631	0.90	-1.1
5,360,717	-				-0.7
5,360,785	+				+0.2
5,360,785	+				-0.7
5,360,785	+				-1.4
5,360,785	+				+0.8
5,360,785	+				-1.2
5,360,786	-				+0.9
5,360,786	-				-0.3
5,360,879	+				-1.0
5,360,879	+				+0.8
5,360,925	+				+0.1
5,360,926	-				+1.2
5,360,929	+				-1.9
5,360,929	+				+0.2
5,360,929	+				-1.5
5,360,929	+				-0.5
5,360,930	-				+2.0
5,360,930	-				+1.6
5,360,993	+				+1.8
5,360,994	-				+1.2
5,360,994	-				+0.5
5,361,082	+				+1.7
5,361,082	+				+0.3
5,361,083	-				+1.8
5,361,208	+		Pf6N2E2_4632	0.14	+1.9
5,361,208	+		Pf6N2E2_4632	0.14	+1.2
5,361,208	+		Pf6N2E2_4632	0.14	+1.5
5,361,208	+		Pf6N2E2_4632	0.14	+1.4
5,361,209	-		Pf6N2E2_4632	0.15	+0.8
5,361,209	-		Pf6N2E2_4632	0.15	-0.3
5,361,209	-		Pf6N2E2_4632	0.15	+0.9
5,361,209	-		Pf6N2E2_4632	0.15	+1.1
5,361,209	-		Pf6N2E2_4632	0.15	+0.1
5,361,209	-		Pf6N2E2_4632	0.15	+0.0
5,361,209	-		Pf6N2E2_4632	0.15	+0.8
5,361,209	-		Pf6N2E2_4632	0.15	+1.8
5,361,268	+		Pf6N2E2_4632	0.18	+1.3
5,361,268	+		Pf6N2E2_4632	0.18	+1.2
5,361,268	+		Pf6N2E2_4632	0.18	+2.1
5,361,269	-		Pf6N2E2_4632	0.18	+1.4
5,361,269	-		Pf6N2E2_4632	0.18	+1.0
5,361,269	-		Pf6N2E2_4632	0.18	+1.5
5,361,269	-		Pf6N2E2_4632	0.18	+1.3
5,361,269	-		Pf6N2E2_4632	0.18	+0.7
5,361,286	+		Pf6N2E2_4632	0.19	+0.9
5,361,286	+		Pf6N2E2_4632	0.19	+1.8
5,361,286	+		Pf6N2E2_4632	0.19	+0.6
5,361,286	+		Pf6N2E2_4632	0.19	+1.0
5,361,287	-		Pf6N2E2_4632	0.19	+0.9
5,361,287	-		Pf6N2E2_4632	0.19	+1.5
5,361,287	-		Pf6N2E2_4632	0.19	+0.1
5,361,287	-		Pf6N2E2_4632	0.19	+2.0
5,361,287	-		Pf6N2E2_4632	0.19	+1.2
5,361,287	-		Pf6N2E2_4632	0.19	+1.4
5,361,287	-		Pf6N2E2_4632	0.19	+1.1
5,361,287	-		Pf6N2E2_4632	0.19	+1.5
5,361,287	-		Pf6N2E2_4632	0.19	+1.2
5,361,287	-		Pf6N2E2_4632	0.19	+0.2
5,361,568	+		Pf6N2E2_4632	0.35	+1.1
5,361,736	+		Pf6N2E2_4632	0.44	+1.1
5,361,748	+		Pf6N2E2_4632	0.45	+1.0
5,361,748	+		Pf6N2E2_4632	0.45	+1.8
5,361,748	+		Pf6N2E2_4632	0.45	+1.8
5,361,748	+		Pf6N2E2_4632	0.45	+0.5
5,361,748	+		Pf6N2E2_4632	0.45	+2.2
5,361,748	+		Pf6N2E2_4632	0.45	+1.3
5,361,749	-		Pf6N2E2_4632	0.45	+1.9
5,361,749	-		Pf6N2E2_4632	0.45	+1.0
5,361,845	-		Pf6N2E2_4632	0.51	+1.2
5,361,845	-		Pf6N2E2_4632	0.51	+1.2
5,361,845	-		Pf6N2E2_4632	0.51	+0.8
5,361,864	+		Pf6N2E2_4632	0.52	+1.3
5,361,864	+		Pf6N2E2_4632	0.52	+2.6
5,361,864	+		Pf6N2E2_4632	0.52	+0.7
5,361,864	+		Pf6N2E2_4632	0.52	+2.0
5,361,864	+		Pf6N2E2_4632	0.52	+1.5
5,361,864	+		Pf6N2E2_4632	0.52	+2.0
5,361,864	+		Pf6N2E2_4632	0.52	+1.3
5,361,864	+		Pf6N2E2_4632	0.52	+1.7
5,361,865	-		Pf6N2E2_4632	0.52	+1.2
5,361,865	-		Pf6N2E2_4632	0.52	+1.1
5,361,922	+		Pf6N2E2_4632	0.55	+2.0
5,361,922	+		Pf6N2E2_4632	0.55	+1.6
5,361,922	+		Pf6N2E2_4632	0.55	+1.3
5,361,922	+		Pf6N2E2_4632	0.55	+1.3
5,361,923	-		Pf6N2E2_4632	0.55	+1.6
5,361,923	-		Pf6N2E2_4632	0.55	+0.4
5,361,923	-		Pf6N2E2_4632	0.55	-0.3
5,362,055	+		Pf6N2E2_4632	0.62	+1.4
5,362,055	+		Pf6N2E2_4632	0.62	+2.3
5,362,055	+		Pf6N2E2_4632	0.62	+0.7
5,362,078	+		Pf6N2E2_4632	0.64	+0.9
5,362,123	+		Pf6N2E2_4632	0.66	+1.2
5,362,186	+		Pf6N2E2_4632	0.70	+1.2
5,362,186	+		Pf6N2E2_4632	0.70	+0.9
5,362,187	-		Pf6N2E2_4632	0.70	+0.2
5,362,187	-		Pf6N2E2_4632	0.70	+2.1
5,362,715	-				-0.6
5,362,750	-				-0.3
5,362,750	-				+0.7
5,362,750	-				+0.6
5,362,750	-				+0.4
5,362,750	-				+0.5
5,362,764	-				-0.9
5,362,931	-				+0.4
5,362,931	-				-0.4
5,362,962	+				+0.3
5,362,963	-				-1.7
5,362,963	-				+0.5
5,362,982	+				-0.2
5,362,983	-				+0.1
5,362,983	-				-0.9
5,362,983	-				+0.6
5,362,983	-				-0.1
5,362,984	+				+3.5
5,362,985	-				-0.3
5,362,985	-				+1.0
5,362,997	+				+0.6
5,362,998	-				-1.3
5,362,998	-				-0.1
5,363,017	+				+1.2
5,363,017	+				-1.9
5,363,017	+				+0.5
5,363,017	+				-2.1
5,363,017	+				+0.3
5,363,018	-				+0.7
5,363,018	-				+0.9
5,363,018	-				-2.2
5,363,021	-				-1.3
5,363,037	+				+0.1
5,363,038	-				+1.1
5,363,038	-				-0.6
5,363,038	-				+0.9
5,363,038	-				+0.1
5,363,038	-				-0.1
5,363,069	+				+0.7
5,363,069	+				+1.9
5,363,070	-				-0.4
5,363,072	+				+0.3
5,363,072	+				-0.4
5,363,072	+				-1.4
5,363,072	+				-2.6
5,363,072	+				+2.2
5,363,072	+				-0.1
5,363,072	+				+1.4
5,363,072	+				+0.1
5,363,072	+				-0.0
5,363,073	-				+1.0
5,363,073	-				-0.2
5,363,073	-				+0.5
5,363,073	-				+0.7
5,363,073	-				-0.5
5,363,073	-				-0.3
5,363,073	-				+0.2
5,363,073	-				+0.6
5,363,073	-				-0.7
5,363,073	-				-0.1
5,363,073	-				-1.3
5,363,073	-				+0.3
5,363,073	-				-0.2
5,363,073	-				-1.0
5,363,073	-				+0.6
5,363,073	-				+1.9
5,363,139	+				+0.8
5,363,139	+				-0.3
5,363,140	-				-1.2
5,363,179	+				+0.2
5,363,180	-				+0.6
5,363,180	-				-0.4
5,363,180	-				-0.3
5,363,218	+				+1.0
5,363,218	+				-0.3
5,363,265	+				-0.5
5,363,265	+				+0.4
5,363,266	-				+0.0
5,363,266	-				-0.4
5,363,299	+				+0.8
5,363,299	+				-0.4
5,363,299	+				+0.7
5,363,300	-				-0.3
5,363,314	+				-0.1
5,363,314	+				-1.5
5,363,315	-				+0.4
5,363,315	-				+0.3
5,363,315	-				+2.9
5,363,349	-				+0.6
5,363,382	+		Pf6N2E2_4633	0.14	-0.4
5,363,382	+		Pf6N2E2_4633	0.14	-0.1
5,363,383	-		Pf6N2E2_4633	0.14	+0.6
5,363,424	+		Pf6N2E2_4633	0.21	-0.6
5,363,424	+		Pf6N2E2_4633	0.21	-1.7
5,363,425	-		Pf6N2E2_4633	0.21	-0.1
5,363,425	-		Pf6N2E2_4633	0.21	+0.6
5,363,427	+		Pf6N2E2_4633	0.22	-1.3
5,363,427	+		Pf6N2E2_4633	0.22	-2.1
5,363,427	+		Pf6N2E2_4633	0.22	+0.4
5,363,427	+		Pf6N2E2_4633	0.22	+0.9
5,363,428	-		Pf6N2E2_4633	0.22	-0.1
5,363,428	-		Pf6N2E2_4633	0.22	+0.6
5,363,550	+		Pf6N2E2_4633	0.44	+0.6
5,363,551	-		Pf6N2E2_4633	0.44	+0.5
5,363,588	+		Pf6N2E2_4633	0.51	-0.8
5,363,589	-		Pf6N2E2_4633	0.51	+0.7
5,363,589	-		Pf6N2E2_4633	0.51	-1.6
5,363,589	-		Pf6N2E2_4633	0.51	-0.2
5,363,598	+		Pf6N2E2_4633	0.53	-0.9
5,363,598	+		Pf6N2E2_4633	0.53	+0.8
5,363,599	-		Pf6N2E2_4633	0.53	+0.2