Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3760

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
4,379,469	+		Pf6N2E2_3758	0.32	+0.2
4,379,469	+		Pf6N2E2_3758	0.32	+2.2
4,379,470	-		Pf6N2E2_3758	0.33	-0.6
4,379,542	+		Pf6N2E2_3758	0.44	+0.5
4,379,637	+		Pf6N2E2_3758	0.59	+0.7
4,379,637	+		Pf6N2E2_3758	0.59	+1.0
4,379,749	+		Pf6N2E2_3758	0.77	-0.4
4,379,749	+		Pf6N2E2_3758	0.77	-1.0
4,379,750	-		Pf6N2E2_3758	0.77	-0.3
4,379,750	-		Pf6N2E2_3758	0.77	+1.4
4,379,750	-		Pf6N2E2_3758	0.77	+0.3
4,379,752	-		Pf6N2E2_3758	0.78	+0.6
4,380,113	+		Pf6N2E2_3759	0.40	+0.7
4,380,113	+		Pf6N2E2_3759	0.40	+0.7
4,380,113	+		Pf6N2E2_3759	0.40	-0.2
4,380,113	+		Pf6N2E2_3759	0.40	+1.1
4,380,113	+		Pf6N2E2_3759	0.40	+0.9
4,380,113	+		Pf6N2E2_3759	0.40	+1.5
4,380,113	+		Pf6N2E2_3759	0.40	+0.2
4,380,113	+		Pf6N2E2_3759	0.40	+0.3
4,380,114	-		Pf6N2E2_3759	0.40	-0.2
4,380,114	-		Pf6N2E2_3759	0.40	+0.5
4,380,114	-		Pf6N2E2_3759	0.40	+0.4
4,380,114	-		Pf6N2E2_3759	0.40	+0.2
4,380,175	-		Pf6N2E2_3759	0.51	-1.1
4,380,291	+		Pf6N2E2_3759	0.71	-0.0
4,380,399	+				+0.1
4,380,555	-				-0.3
4,380,555	-				-3.1
4,380,664	+		Pf6N2E2_3760	0.20	+1.2
4,380,664	+		Pf6N2E2_3760	0.20	+0.3
4,380,665	-		Pf6N2E2_3760	0.20	+0.6
4,380,665	-		Pf6N2E2_3760	0.20	+0.7
4,380,665	-		Pf6N2E2_3760	0.20	+0.2
4,380,665	-		Pf6N2E2_3760	0.20	+0.7
4,380,752	-		Pf6N2E2_3760	0.28	+0.9
4,380,752	-		Pf6N2E2_3760	0.28	+1.7
4,380,752	-		Pf6N2E2_3760	0.28	+0.7
4,380,752	-		Pf6N2E2_3760	0.28	+0.3
4,380,867	-		Pf6N2E2_3760	0.39	-1.6
4,380,867	-		Pf6N2E2_3760	0.39	+1.0
4,380,868	+		Pf6N2E2_3760	0.39	-0.5
4,380,868	+		Pf6N2E2_3760	0.39	-0.2
4,380,868	+		Pf6N2E2_3760	0.39	-1.2
4,380,868	+		Pf6N2E2_3760	0.39	+0.0
4,380,868	+		Pf6N2E2_3760	0.39	+0.2
4,380,868	+		Pf6N2E2_3760	0.39	+0.8
4,380,868	+		Pf6N2E2_3760	0.39	+0.4
4,380,869	-		Pf6N2E2_3760	0.39	+1.9
4,380,869	-		Pf6N2E2_3760	0.39	+1.5
4,380,869	-		Pf6N2E2_3760	0.39	-0.5
4,380,869	-		Pf6N2E2_3760	0.39	-0.6
4,380,869	-		Pf6N2E2_3760	0.39	+1.0
4,380,869	-		Pf6N2E2_3760	0.39	+1.0
4,380,869	-		Pf6N2E2_3760	0.39	+0.6
4,380,869	-		Pf6N2E2_3760	0.39	-0.4
4,380,897	-		Pf6N2E2_3760	0.42	+1.3
4,381,001	-		Pf6N2E2_3760	0.51	-0.4
4,381,177	+		Pf6N2E2_3760	0.68	+0.3
4,381,177	+		Pf6N2E2_3760	0.68	-0.2
4,381,177	+		Pf6N2E2_3760	0.68	-0.1
4,381,177	+		Pf6N2E2_3760	0.68	-0.0
4,381,177	+		Pf6N2E2_3760	0.68	+0.9
4,381,177	+		Pf6N2E2_3760	0.68	+0.7
4,381,177	+		Pf6N2E2_3760	0.68	+0.0
4,381,177	+		Pf6N2E2_3760	0.68	+1.6
4,381,177	+		Pf6N2E2_3760	0.68	-0.8
4,381,177	+		Pf6N2E2_3760	0.68	-0.3
4,381,177	+		Pf6N2E2_3760	0.68	+0.9
4,381,177	+		Pf6N2E2_3760	0.68	-0.6
4,381,177	+		Pf6N2E2_3760	0.68	+0.5
4,381,178	-		Pf6N2E2_3760	0.68	+1.2
4,381,178	-		Pf6N2E2_3760	0.68	+1.1
4,381,178	-		Pf6N2E2_3760	0.68	+1.2
4,381,178	-		Pf6N2E2_3760	0.68	+1.6
4,381,178	-		Pf6N2E2_3760	0.68	+0.5
4,381,178	-		Pf6N2E2_3760	0.68	+0.7
4,381,178	-		Pf6N2E2_3760	0.68	+0.9
4,381,178	-		Pf6N2E2_3760	0.68	+0.9
4,381,178	-		Pf6N2E2_3760	0.68	+0.4
4,381,178	-		Pf6N2E2_3760	0.68	+0.9
4,381,178	-		Pf6N2E2_3760	0.68	+0.9
4,381,178	-		Pf6N2E2_3760	0.68	+0.2
4,381,178	-		Pf6N2E2_3760	0.68	+0.6
4,381,178	-		Pf6N2E2_3760	0.68	+1.1
4,381,403	-		Pf6N2E2_3760	0.89	+1.0
4,381,403	-		Pf6N2E2_3760	0.89	+0.9
4,381,557	+				+0.6
4,381,557	+				+0.4
4,381,558	-				-2.1
4,381,561	-				-1.4
4,381,561	-				-0.3
4,381,628	+				+0.6
4,381,628	+				-0.1
4,381,628	+				-0.2
4,381,629	-				-3.4
4,381,629	-				-1.4
4,381,630	+				+0.9
4,381,630	+				-1.5
4,381,631	-				-2.6
4,381,631	-				-0.9
4,381,631	-				-3.5
4,381,808	-				-3.2
4,381,812	+				-4.6
4,381,848	+				-3.9
4,381,848	+				-1.6
4,381,848	+				-4.1
4,381,849	-				-0.1
4,381,849	-				-3.0
4,381,973	+				-0.4
4,381,973	+				-1.0
4,381,973	+				-3.0
4,381,974	-				-3.6
4,381,974	-				-4.1
4,381,974	-				-4.2
4,381,974	-				-3.8
4,381,974	-				-4.5
4,381,974	-				-3.7
4,382,005	+				-1.4
4,382,005	+				-1.7
4,382,213	-		Pf6N2E2_3761	0.16	-1.8
4,382,213	-		Pf6N2E2_3761	0.16	-3.1
4,382,213	-		Pf6N2E2_3761	0.16	-2.2
4,382,213	-		Pf6N2E2_3761	0.16	-3.2
4,382,213	-		Pf6N2E2_3761	0.16	-4.8
4,382,227	+		Pf6N2E2_3761	0.17	-4.0
4,382,227	+		Pf6N2E2_3761	0.17	-4.4
4,382,228	-		Pf6N2E2_3761	0.17	-3.3
4,382,272	+		Pf6N2E2_3761	0.19	-4.7
4,382,272	+		Pf6N2E2_3761	0.19	-1.2
4,382,272	+		Pf6N2E2_3761	0.19	-2.0
4,382,272	+		Pf6N2E2_3761	0.19	-2.6
4,382,272	+		Pf6N2E2_3761	0.19	-4.4
4,382,273	-		Pf6N2E2_3761	0.19	-2.2
4,382,273	-		Pf6N2E2_3761	0.19	-4.5
4,382,273	-		Pf6N2E2_3761	0.19	-4.4
4,382,273	-		Pf6N2E2_3761	0.19	-3.0
4,382,413	+		Pf6N2E2_3761	0.25	-2.3
4,382,413	+		Pf6N2E2_3761	0.25	-0.9
4,382,413	+		Pf6N2E2_3761	0.25	-4.5
4,382,413	+		Pf6N2E2_3761	0.25	-2.0
4,382,413	+		Pf6N2E2_3761	0.25	-3.0
4,382,413	+		Pf6N2E2_3761	0.25	-3.5
4,382,413	+		Pf6N2E2_3761	0.25	-1.9
4,382,413	+		Pf6N2E2_3761	0.25	-4.6
4,382,413	+		Pf6N2E2_3761	0.25	-3.0
4,382,414	-		Pf6N2E2_3761	0.25	-2.2
4,382,414	-		Pf6N2E2_3761	0.25	-3.4
4,382,414	-		Pf6N2E2_3761	0.25	-2.4
4,382,414	-		Pf6N2E2_3761	0.25	-4.2
4,382,414	-		Pf6N2E2_3761	0.25	-3.3
4,382,414	-		Pf6N2E2_3761	0.25	-2.5
4,382,443	+		Pf6N2E2_3761	0.26	-3.9
4,382,444	-		Pf6N2E2_3761	0.26	-3.1
4,382,479	+		Pf6N2E2_3761	0.28	-3.7
4,382,479	+		Pf6N2E2_3761	0.28	-2.8
4,382,480	-		Pf6N2E2_3761	0.28	-3.0
4,382,480	-		Pf6N2E2_3761	0.28	-4.4
4,382,480	-		Pf6N2E2_3761	0.28	-4.0
4,382,480	-		Pf6N2E2_3761	0.28	-2.7
4,382,487	-		Pf6N2E2_3761	0.28	+0.3
4,382,513	-		Pf6N2E2_3761	0.29	-3.2
4,382,514	+		Pf6N2E2_3761	0.29	-2.6
4,382,515	-		Pf6N2E2_3761	0.29	-2.8