Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3463

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
4,043,240	-		Pf6N2E2_3462	0.45	-0.5
4,043,359	+		Pf6N2E2_3462	0.53	+0.4
4,043,359	+		Pf6N2E2_3462	0.53	-0.4
4,043,360	-		Pf6N2E2_3462	0.53	+0.7
4,043,360	-		Pf6N2E2_3462	0.53	-0.6
4,043,360	-		Pf6N2E2_3462	0.53	+1.2
4,043,360	-		Pf6N2E2_3462	0.53	-0.6
4,043,360	-		Pf6N2E2_3462	0.53	-1.3
4,043,360	-		Pf6N2E2_3462	0.53	-0.8
4,043,360	-		Pf6N2E2_3462	0.53	+1.0
4,043,360	-		Pf6N2E2_3462	0.53	+0.1
4,043,365	+		Pf6N2E2_3462	0.54	+0.3
4,043,366	-		Pf6N2E2_3462	0.54	+0.1
4,043,366	-		Pf6N2E2_3462	0.54	-0.8
4,043,581	+		Pf6N2E2_3462	0.68	+0.3
4,043,582	-		Pf6N2E2_3462	0.68	+0.5
4,043,582	-		Pf6N2E2_3462	0.68	+0.4
4,043,582	-		Pf6N2E2_3462	0.68	+0.1
4,043,679	+		Pf6N2E2_3462	0.75	+0.4
4,043,679	+		Pf6N2E2_3462	0.75	+0.2
4,043,679	+		Pf6N2E2_3462	0.75	+0.5
4,043,680	-		Pf6N2E2_3462	0.75	-0.9
4,043,692	+		Pf6N2E2_3462	0.76	+1.8
4,043,813	+		Pf6N2E2_3462	0.84	-1.7
4,043,814	-		Pf6N2E2_3462	0.84	-0.2
4,043,882	+		Pf6N2E2_3462	0.88	+1.1
4,043,882	+		Pf6N2E2_3462	0.88	-0.3
4,043,882	+		Pf6N2E2_3462	0.88	+0.5
4,043,883	-		Pf6N2E2_3462	0.88	-0.7
4,043,883	-		Pf6N2E2_3462	0.88	-0.1
4,043,883	-		Pf6N2E2_3462	0.88	+0.1
4,043,961	-				+0.1
4,043,961	-				+0.3
4,044,072	-				+0.7
4,044,102	+				-0.0
4,044,112	+				-0.5
4,044,112	+				-1.1
4,044,112	+				+0.8
4,044,112	+				-1.1
4,044,112	+				+0.4
4,044,112	+				+0.8
4,044,112	+				+0.6
4,044,112	+				-0.5
4,044,112	+				+1.2
4,044,113	-				+0.0
4,044,113	-				+0.8
4,044,113	-				+0.7
4,044,113	-				-0.3
4,044,113	-				-0.1
4,044,113	-				+0.4
4,044,113	-				+0.3
4,044,240	+				+1.5
4,044,240	+				+2.2
4,044,240	+				+2.0
4,044,240	+				+2.1
4,044,240	+				+1.0
4,044,240	+				+1.4
4,044,240	+				+0.6
4,044,240	+				+2.5
4,044,240	+				+1.6
4,044,241	-				+1.4
4,044,241	-				+0.5
4,044,241	-				+1.9
4,044,337	-		Pf6N2E2_3463	0.15	+1.0
4,044,337	-		Pf6N2E2_3463	0.15	+0.7
4,044,337	-		Pf6N2E2_3463	0.15	+1.4
4,044,340	+		Pf6N2E2_3463	0.15	+0.8
4,044,340	+		Pf6N2E2_3463	0.15	+0.1
4,044,341	-		Pf6N2E2_3463	0.16	-0.2
4,044,341	-		Pf6N2E2_3463	0.16	+1.4
4,044,341	-		Pf6N2E2_3463	0.16	+1.4
4,044,341	-		Pf6N2E2_3463	0.16	-1.0
4,044,492	+		Pf6N2E2_3463	0.27	+0.9
4,044,492	+		Pf6N2E2_3463	0.27	+0.4
4,044,492	+		Pf6N2E2_3463	0.27	+1.2
4,044,493	-		Pf6N2E2_3463	0.27	+1.5
4,044,499	-		Pf6N2E2_3463	0.27	+1.6
4,044,555	+		Pf6N2E2_3463	0.31	+0.9
4,044,555	+		Pf6N2E2_3463	0.31	+1.3
4,044,555	+		Pf6N2E2_3463	0.31	+1.2
4,044,556	-		Pf6N2E2_3463	0.31	+0.5
4,044,754	-		Pf6N2E2_3463	0.46	+0.5
4,044,754	-		Pf6N2E2_3463	0.46	+1.0
4,044,754	-		Pf6N2E2_3463	0.46	-0.5
4,044,900	+		Pf6N2E2_3463	0.56	+0.5
4,044,900	+		Pf6N2E2_3463	0.56	+0.6
4,044,900	+		Pf6N2E2_3463	0.56	-0.3
4,045,021	-		Pf6N2E2_3463	0.65	-0.0
4,045,021	-		Pf6N2E2_3463	0.65	-0.8
4,045,077	+		Pf6N2E2_3463	0.69	+1.5
4,045,225	-		Pf6N2E2_3463	0.80	+1.0
4,045,317	+		Pf6N2E2_3463	0.87	+0.7
4,045,317	+		Pf6N2E2_3463	0.87	+0.8
4,045,317	+		Pf6N2E2_3463	0.87	+0.7
4,045,318	-		Pf6N2E2_3463	0.87	+1.0
4,045,407	+				+1.9
4,045,407	+				+0.7
4,045,408	-				+0.8
4,045,498	+				+0.9
4,045,499	-				+0.6
4,045,499	-				+0.8
4,045,531	+				+1.4
4,045,531	+				+0.8
4,045,532	-				+0.2
4,045,532	-				+0.2
4,045,532	-				+0.9
4,045,532	-				+0.9
4,045,532	-				+1.7
4,045,573	-				-0.3
4,045,599	+				+0.1
4,045,648	-				+0.8
4,045,648	-				+0.5
4,045,834	+		Pf6N2E2_3464	0.25	+0.5
4,045,834	+		Pf6N2E2_3464	0.25	+0.0
4,045,834	+		Pf6N2E2_3464	0.25	+0.1
4,045,834	+		Pf6N2E2_3464	0.25	+0.4
4,045,853	+		Pf6N2E2_3464	0.27	+0.7
4,045,853	+		Pf6N2E2_3464	0.27	+1.5
4,045,854	-		Pf6N2E2_3464	0.28	-0.9
4,045,854	-		Pf6N2E2_3464	0.28	-0.3
4,046,084	+		Pf6N2E2_3464	0.53	-0.3
4,046,084	+		Pf6N2E2_3464	0.53	-0.0
4,046,084	+		Pf6N2E2_3464	0.53	-0.1
4,046,084	+		Pf6N2E2_3464	0.53	+0.4
4,046,084	+		Pf6N2E2_3464	0.53	+0.3
4,046,084	+		Pf6N2E2_3464	0.53	+0.9
4,046,119	+		Pf6N2E2_3464	0.56	+0.3
4,046,131	+		Pf6N2E2_3464	0.58	-0.9
4,046,131	+		Pf6N2E2_3464	0.58	-0.1
4,046,132	-		Pf6N2E2_3464	0.58	-0.2
4,046,152	+		Pf6N2E2_3464	0.60	+2.0
4,046,152	+		Pf6N2E2_3464	0.60	+0.4
4,046,153	-		Pf6N2E2_3464	0.60	-0.2
4,046,153	-		Pf6N2E2_3464	0.60	-0.3
4,046,153	-		Pf6N2E2_3464	0.60	+1.8
4,046,179	+		Pf6N2E2_3464	0.63	+0.5
4,046,179	+		Pf6N2E2_3464	0.63	+0.6
4,046,179	+		Pf6N2E2_3464	0.63	+0.5
4,046,179	+		Pf6N2E2_3464	0.63	+0.6
4,046,179	+		Pf6N2E2_3464	0.63	+1.0
4,046,180	-		Pf6N2E2_3464	0.63	+1.0
4,046,262	-		Pf6N2E2_3464	0.72	+0.3
4,046,262	-		Pf6N2E2_3464	0.72	+0.1
4,046,344	+		Pf6N2E2_3464	0.81	+0.5
4,046,344	+		Pf6N2E2_3464	0.81	+1.1
4,046,344	+		Pf6N2E2_3464	0.81	+0.8
4,046,344	+		Pf6N2E2_3464	0.81	-0.2
4,046,345	-		Pf6N2E2_3464	0.81	+0.7
4,046,345	-		Pf6N2E2_3464	0.81	-1.5
4,046,345	-		Pf6N2E2_3464	0.81	-0.1
4,046,353	+		Pf6N2E2_3464	0.82	-0.6
4,046,353	+		Pf6N2E2_3464	0.82	+1.2
4,046,368	+		Pf6N2E2_3464	0.83	+0.9
4,046,368	+		Pf6N2E2_3464	0.83	-1.4
4,046,368	+		Pf6N2E2_3464	0.83	+0.1
4,046,428	+		Pf6N2E2_3464	0.90	+0.1
4,046,428	+		Pf6N2E2_3464	0.90	-0.5
4,046,429	-				-0.3
4,046,429	-				+0.0