Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24175

Experiment: R2A with Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.001 mg/ml
5,887,712	+		CA265_RS24170	0.64	+0.1
5,887,790	+		CA265_RS24170	0.71	+0.8
5,887,821	-		CA265_RS24170	0.73	+0.2
5,887,835	-		CA265_RS24170	0.74	+0.1
5,887,835	-		CA265_RS24170	0.74	+0.6
5,887,841	-		CA265_RS24170	0.75	+0.4
5,887,871	+		CA265_RS24170	0.77	-0.5
5,887,937	-		CA265_RS24170	0.83	+1.4
5,887,938	+		CA265_RS24170	0.83	-0.2
5,887,939	-		CA265_RS24170	0.83	+0.5
5,887,939	-		CA265_RS24170	0.83	-0.3
5,887,939	-		CA265_RS24170	0.83	-0.1
5,887,939	-		CA265_RS24170	0.83	-0.1
5,887,946	-		CA265_RS24170	0.83	+0.3
5,887,959	-		CA265_RS24170	0.85	-0.4
5,888,008	-		CA265_RS24170	0.89	+2.8
5,888,038	+				-0.3
5,888,039	-				+0.9
5,888,039	-				-0.6
5,888,044	-				+0.6
5,888,048	-				+0.8
5,888,056	+				-0.6
5,888,108	+				+0.4
5,888,138	-				+0.6
5,888,143	-				-0.1
5,888,207	+				-0.1
5,888,331	+				-1.7
5,888,332	-				+0.4
5,888,337	+				+1.4
5,888,337	+				+0.5
5,888,342	+				-0.4
5,888,527	-				+0.2
5,888,630	-				+0.4
5,888,635	+				+0.4
5,888,636	-				+0.3
5,888,636	-				-1.6
5,888,636	-				+3.3
5,888,640	+				-0.1
5,888,700	-				+0.5
5,888,740	+		CA265_RS24175	0.13	-0.6
5,888,740	+		CA265_RS24175	0.13	-1.6
5,888,742	+		CA265_RS24175	0.13	-1.7
5,888,742	+		CA265_RS24175	0.13	-2.0
5,888,743	-		CA265_RS24175	0.13	+0.7
5,888,767	-		CA265_RS24175	0.16	-1.6
5,888,820	-		CA265_RS24175	0.23	-0.4
5,888,866	-		CA265_RS24175	0.28	-0.6
5,888,898	-		CA265_RS24175	0.32	+0.8
5,888,899	+		CA265_RS24175	0.32	-0.8
5,888,943	+		CA265_RS24175	0.38	-1.8
5,889,117	+		CA265_RS24175	0.59	-2.7
5,889,136	+		CA265_RS24175	0.62	-2.6
5,889,154	+		CA265_RS24175	0.64	-3.3
5,889,155	-		CA265_RS24175	0.64	+1.1
5,889,156	+		CA265_RS24175	0.64	-2.8
5,889,186	+		CA265_RS24175	0.68	-2.8
5,889,250	+		CA265_RS24175	0.76	-2.8
5,889,281	-		CA265_RS24175	0.80	+0.2
5,889,297	+		CA265_RS24175	0.82	-0.9
5,889,297	+		CA265_RS24175	0.82	-3.9
5,889,316	+		CA265_RS24175	0.84	-2.6
5,889,317	-		CA265_RS24175	0.84	+0.5
5,889,317	-		CA265_RS24175	0.84	+0.4
5,889,353	+		CA265_RS24175	0.89	+1.4
5,889,454	+				-0.9
5,889,455	-				+0.6
5,889,455	-				+0.9
5,889,455	-				-0.6
5,889,494	+				-2.7
5,889,603	-				-2.2
5,889,663	+				-2.4
5,889,664	-				+0.4
5,889,730	+				-2.6
5,889,741	-				-2.6
5,889,741	-				-1.4
5,889,745	-				-2.7
5,889,765	-				-1.9
5,889,872	+				-4.6
5,889,894	-				-4.2
5,889,963	-		CA265_RS24180	0.11	-1.6
5,890,097	+		CA265_RS24180	0.15	-2.8
5,890,132	+		CA265_RS24180	0.16	-3.1
5,890,133	-		CA265_RS24180	0.16	-2.1
5,890,172	+		CA265_RS24180	0.17	-2.5
5,890,187	+		CA265_RS24180	0.18	-2.4
5,890,187	+		CA265_RS24180	0.18	-3.6
5,890,188	-		CA265_RS24180	0.18	-2.3
5,890,195	+		CA265_RS24180	0.18	-3.5
5,890,199	+		CA265_RS24180	0.18	-2.2
5,890,204	+		CA265_RS24180	0.18	-2.0
5,890,249	-		CA265_RS24180	0.20	-2.2
5,890,298	+		CA265_RS24180	0.21	-4.3
5,890,378	+		CA265_RS24180	0.24	-2.4
5,890,441	+		CA265_RS24180	0.26	-2.0