Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19500

Experiment: R2A with Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.001 mg/ml
4,834,405	+				+1.6
4,834,414	+				-0.4
4,834,666	+		CA265_RS19495	0.43	-1.0
4,834,691	+		CA265_RS19495	0.47	-0.2
4,834,800	-		CA265_RS19495	0.64	-0.3
4,834,800	-		CA265_RS19495	0.64	+0.1
4,834,802	+		CA265_RS19495	0.64	+0.1
4,834,839	+		CA265_RS19495	0.70	-2.6
4,834,841	+		CA265_RS19495	0.70	+0.1
4,834,842	-		CA265_RS19495	0.70	+0.4
4,834,846	+		CA265_RS19495	0.71	+0.7
4,834,856	-		CA265_RS19495	0.73	+1.4
4,834,886	+		CA265_RS19495	0.77	+0.8
4,834,902	+		CA265_RS19495	0.80	-0.1
4,834,903	-		CA265_RS19495	0.80	+0.7
4,835,023	+				-0.7
4,835,031	+				-0.1
4,835,064	-				-0.2
4,835,088	+				-0.1
4,835,095	-				-0.2
4,835,103	-				+0.6
4,835,103	-				+1.2
4,835,128	+		CA265_RS19500	0.11	+0.0
4,835,131	-		CA265_RS19500	0.11	-0.2
4,835,146	-		CA265_RS19500	0.13	+0.3
4,835,209	-		CA265_RS19500	0.21	+0.7
4,835,209	-		CA265_RS19500	0.21	+0.2
4,835,251	+		CA265_RS19500	0.27	-0.6
4,835,252	-		CA265_RS19500	0.27	-1.1
4,835,308	-		CA265_RS19500	0.34	+0.7
4,835,402	+		CA265_RS19500	0.47	+1.0
4,835,450	-		CA265_RS19500	0.53	+1.8
4,835,530	-		CA265_RS19500	0.63	-0.0
4,835,596	-		CA265_RS19500	0.72	+0.5
4,835,596	-		CA265_RS19500	0.72	+0.8
4,835,641	-		CA265_RS19500	0.78	+0.3
4,835,714	+		CA265_RS19500	0.88	+0.2
4,835,761	+				+0.0
4,835,761	+				+0.2
4,835,762	-				-0.1
4,835,762	-				+0.3
4,835,801	+				-0.3
4,835,813	+				+0.7
4,835,823	+				-0.4
4,835,824	-				-0.5
4,835,849	+				-1.2
4,835,852	-				+0.2
4,835,869	+				+0.0
4,835,869	+				-2.6
4,835,890	+				-0.6
4,835,894	-				-0.1
4,835,943	-				-0.2
4,835,980	+				-0.7
4,836,036	+				-0.5
4,836,097	+				-0.5
4,836,112	+				-0.1
4,836,113	-				+1.1
4,836,119	-				-0.2
4,836,121	-				-0.6
4,836,138	+				-0.6
4,836,138	+				+0.2
4,836,161	+				-0.7
4,836,161	+				+0.5
4,836,166	+				-0.3
4,836,175	-				-1.9
4,836,207	-				-0.1
4,836,208	+				-0.4
4,836,336	+				+0.9
4,836,354	+				-0.6
4,836,364	-				-0.1
4,836,368	+				-0.3
4,836,434	+		CA265_RS19505	0.25	+0.5
4,836,509	+		CA265_RS19505	0.43	-0.7
4,836,520	-		CA265_RS19505	0.46	+0.7
4,836,552	+		CA265_RS19505	0.54	+1.4
4,836,571	-		CA265_RS19505	0.58	-0.0
4,836,571	-		CA265_RS19505	0.58	+0.4
4,836,596	-		CA265_RS19505	0.64	+1.0
4,836,629	+		CA265_RS19505	0.72	-1.1
4,836,629	+		CA265_RS19505	0.72	+0.4
4,836,632	-		CA265_RS19505	0.73	-0.3
4,836,648	+		CA265_RS19505	0.77	+0.7
4,836,649	-		CA265_RS19505	0.77	-0.3
4,836,681	+		CA265_RS19505	0.85	+0.1
4,836,682	-		CA265_RS19505	0.85	-0.4
4,836,715	-				-0.1
4,836,724	-				+0.4
4,836,724	-				+0.3
4,836,741	-				-0.2
4,836,746	-				+0.4
4,836,782	-				-0.3
4,836,806	+				+1.0
4,836,807	-				+0.2