Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18485

Experiment: R2A with Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.001 mg/ml
4,598,307	+		CA265_RS18470	0.69	+0.6
4,598,348	-		CA265_RS18470	0.72	+0.4
4,598,373	+		CA265_RS18470	0.74	+0.3
4,598,374	-		CA265_RS18470	0.74	-0.5
4,598,378	-		CA265_RS18470	0.74	+2.2
4,598,382	+		CA265_RS18470	0.74	+0.1
4,598,412	-		CA265_RS18470	0.77	+0.1
4,598,416	+		CA265_RS18470	0.77	-0.4
4,598,420	-		CA265_RS18470	0.78	+0.1
4,598,430	+		CA265_RS18470	0.78	+0.5
4,598,527	-		CA265_RS18470	0.86	+1.2
4,598,592	-				+0.4
4,598,689	-				+0.3
4,598,705	+				+0.2
4,598,705	+				-0.4
4,598,706	-				+0.8
4,598,706	-				+0.4
4,598,706	-				+0.5
4,598,707	+				-0.2
4,598,719	+				-0.1
4,598,737	-				+0.0
4,598,775	-		CA265_RS18475	0.13	+1.1
4,598,822	+		CA265_RS18475	0.27	+0.1
4,598,853	+		CA265_RS18475	0.36	-1.2
4,598,861	+		CA265_RS18475	0.38	+0.1
4,598,896	-		CA265_RS18475	0.49	-0.8
4,598,915	-		CA265_RS18475	0.55	+0.2
4,598,928	+		CA265_RS18475	0.59	-0.8
4,598,929	-		CA265_RS18475	0.59	+0.2
4,598,929	-		CA265_RS18475	0.59	+0.5
4,598,978	-		CA265_RS18475	0.74	+0.2
4,599,014	-		CA265_RS18475	0.84	-0.2
4,599,047	-				-1.8
4,599,066	+				+0.7
4,599,071	-				-0.2
4,599,253	+				-1.4
4,599,363	+				+0.2
4,599,394	-				+1.5
4,599,401	-				+0.2
4,599,453	+		CA265_RS18485	0.13	+0.2
4,599,453	+		CA265_RS18485	0.13	+0.6
4,599,500	-		CA265_RS18485	0.17	+0.5
4,599,500	-		CA265_RS18485	0.17	-1.8
4,599,519	-		CA265_RS18485	0.18	+1.5
4,599,519	-		CA265_RS18485	0.18	+1.5
4,599,580	-		CA265_RS18485	0.23	+0.7
4,599,580	-		CA265_RS18485	0.23	+1.5
4,599,941	+		CA265_RS18485	0.50	+0.6
4,599,976	+		CA265_RS18485	0.53	+0.8
4,600,227	+		CA265_RS18485	0.72	+0.3
4,600,228	-		CA265_RS18485	0.72	+1.1
4,600,346	-		CA265_RS18485	0.80	+0.0
4,600,409	+		CA265_RS18485	0.85	-0.3
4,600,409	+		CA265_RS18485	0.85	+0.3
4,600,504	+				-0.3
4,600,505	-				+1.5
4,600,577	-				+0.9
4,600,618	-				+0.4
4,600,688	-		CA265_RS18490	0.16	+0.3
4,600,693	+		CA265_RS18490	0.17	+0.8
4,600,702	+		CA265_RS18490	0.20	+0.3
4,600,723	+		CA265_RS18490	0.26	-0.3
4,600,734	+		CA265_RS18490	0.29	+0.3
4,600,785	+		CA265_RS18490	0.45	-0.1
4,600,824	-		CA265_RS18490	0.56	+0.1
4,600,928	-		CA265_RS18490	0.88	-0.5
4,600,929	+		CA265_RS18490	0.88	+0.1
4,600,929	+		CA265_RS18490	0.88	-1.7
4,600,930	-		CA265_RS18490	0.88	+1.5
4,600,945	-				+0.1
4,600,980	-				+0.9
4,600,982	+				-1.1
4,601,036	+		CA265_RS18495	0.31	+0.6
4,601,060	+		CA265_RS18495	0.41	-0.1
4,601,206	-				+0.2
4,601,211	-				+1.1
4,601,284	+				-0.8
4,601,293	-				+0.7
4,601,366	-		CA265_RS18500	0.13	-0.7
4,601,399	+		CA265_RS18500	0.16	+0.3
4,601,487	+		CA265_RS18500	0.24	-0.3
4,601,525	-		CA265_RS18500	0.28	+0.3
4,601,558	-		CA265_RS18500	0.31	-0.8
4,601,558	-		CA265_RS18500	0.31	-0.4