Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18120

Experiment: R2A with Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.001 mg/ml
4,522,090	-				+0.7
4,522,090	-				-1.1
4,522,106	-				+1.2
4,522,144	+				+0.4
4,522,148	-				-1.1
4,522,152	-				+0.2
4,522,155	-				+0.1
4,522,211	+				+0.4
4,522,236	+				+0.7
4,522,237	-				+0.4
4,522,240	-				+0.6
4,522,277	-		CA265_RS18115	0.14	+0.5
4,522,284	-		CA265_RS18115	0.15	+1.0
4,522,284	-		CA265_RS18115	0.15	+1.3
4,522,294	+		CA265_RS18115	0.16	+0.1
4,522,392	-		CA265_RS18115	0.26	+0.9
4,522,394	+		CA265_RS18115	0.27	+0.6
4,522,451	-		CA265_RS18115	0.33	+0.1
4,522,451	-		CA265_RS18115	0.33	+0.7
4,522,451	-		CA265_RS18115	0.33	+0.8
4,522,452	+		CA265_RS18115	0.33	+1.0
4,522,452	+		CA265_RS18115	0.33	+0.4
4,522,452	+		CA265_RS18115	0.33	+1.5
4,522,453	-		CA265_RS18115	0.33	+1.2
4,522,457	-		CA265_RS18115	0.34	+0.2
4,522,457	-		CA265_RS18115	0.34	+0.8
4,522,461	+		CA265_RS18115	0.34	+0.7
4,522,462	-		CA265_RS18115	0.34	+0.9
4,522,528	+		CA265_RS18115	0.41	+0.6
4,522,548	+		CA265_RS18115	0.43	+0.3
4,522,553	-		CA265_RS18115	0.44	+0.0
4,522,683	-		CA265_RS18115	0.58	+0.6
4,522,683	-		CA265_RS18115	0.58	-0.4
4,522,718	-		CA265_RS18115	0.62	+0.2
4,522,720	+		CA265_RS18115	0.62	+0.1
4,522,721	-		CA265_RS18115	0.62	+1.0
4,522,761	+		CA265_RS18115	0.67	+0.4
4,522,775	-		CA265_RS18115	0.68	-1.0
4,522,888	-		CA265_RS18115	0.81	-1.2
4,522,899	+		CA265_RS18115	0.82	+1.2
4,522,920	+		CA265_RS18115	0.84	+0.4
4,522,964	-		CA265_RS18115	0.89	-0.5
4,522,995	+				+0.4
4,523,027	-				+0.6
4,523,040	+				+0.2
4,523,050	+				+0.7
4,523,084	-				-0.4
4,523,158	+				-0.2
4,523,158	+				-1.9
4,523,158	+				+0.6
4,523,167	+				+0.2
4,523,177	+				+1.0
4,523,178	-				+1.3
4,523,251	+		CA265_RS18120	0.12	+0.8
4,523,264	-		CA265_RS18120	0.13	-0.7
4,523,266	-		CA265_RS18120	0.13	-0.2
4,523,273	+		CA265_RS18120	0.13	+0.7
4,523,351	+		CA265_RS18120	0.18	+0.7
4,523,405	-		CA265_RS18120	0.22	+0.8
4,523,468	-		CA265_RS18120	0.26	-0.1
4,523,560	+		CA265_RS18120	0.32	-0.2
4,523,594	-		CA265_RS18120	0.34	-0.2
4,523,622	-		CA265_RS18120	0.36	-0.2
4,523,692	-		CA265_RS18120	0.40	+0.9
4,523,700	-		CA265_RS18120	0.41	-1.7
4,523,732	-		CA265_RS18120	0.43	+0.4
4,523,735	+		CA265_RS18120	0.43	+0.9
4,523,736	-		CA265_RS18120	0.43	+0.8
4,523,774	-		CA265_RS18120	0.46	+0.8
4,523,776	-		CA265_RS18120	0.46	+0.3
4,523,806	+		CA265_RS18120	0.48	+0.7
4,523,807	-		CA265_RS18120	0.48	-0.7
4,523,824	+		CA265_RS18120	0.49	+0.8
4,523,824	+		CA265_RS18120	0.49	-1.1
4,523,825	-		CA265_RS18120	0.49	-0.8
4,523,873	-		CA265_RS18120	0.52	+0.3
4,523,874	+		CA265_RS18120	0.52	+0.2
4,523,875	-		CA265_RS18120	0.52	+0.1
4,523,902	+		CA265_RS18120	0.54	+2.1
4,523,902	+		CA265_RS18120	0.54	+0.5
4,523,998	+		CA265_RS18120	0.60	+0.5
4,524,026	-		CA265_RS18120	0.62	-0.3
4,524,026	-		CA265_RS18120	0.62	-1.0
4,524,064	-		CA265_RS18120	0.65	+1.0
4,524,064	-		CA265_RS18120	0.65	+1.2
4,524,125	+		CA265_RS18120	0.69	+1.5
4,524,126	-		CA265_RS18120	0.69	+0.8
4,524,149	+		CA265_RS18120	0.70	-0.2
4,524,226	+		CA265_RS18120	0.75	+0.7
4,524,226	+		CA265_RS18120	0.75	+1.3
4,524,227	-		CA265_RS18120	0.75	+0.7
4,524,239	-		CA265_RS18120	0.76	+0.2
4,524,253	+		CA265_RS18120	0.77	+0.5
4,524,328	-		CA265_RS18120	0.82	-0.2
4,524,336	-		CA265_RS18120	0.82	+1.5
4,524,376	-		CA265_RS18120	0.85	+1.1
4,524,376	-		CA265_RS18120	0.85	+0.3
4,524,442	+		CA265_RS18120	0.89	+0.3
4,524,446	-		CA265_RS18120	0.90	-0.8
4,524,446	-		CA265_RS18120	0.90	-0.5
4,524,451	+				+0.3
4,524,451	+				-0.5
4,524,452	-				+0.4
4,524,455	+				-0.4
4,524,473	-				-0.0
4,524,521	+				+0.2
4,524,555	+				+1.2
4,524,555	+				+0.6
4,524,556	-				+1.0
4,524,563	-				+0.0
4,524,614	-				-0.1
4,524,639	+				+0.0
4,524,650	+				+0.1
4,524,650	+				+0.3
4,524,679	+				-0.3
4,524,679	+				+0.2
4,524,698	-				+1.4
4,524,909	+		CA265_RS18125	0.33	-0.0
4,524,959	-		CA265_RS18125	0.39	+0.3
4,524,959	-		CA265_RS18125	0.39	+0.6
4,524,980	+		CA265_RS18125	0.41	-1.4
4,524,981	-		CA265_RS18125	0.42	+1.0
4,524,981	-		CA265_RS18125	0.42	+0.4
4,524,981	-		CA265_RS18125	0.42	+1.5
4,524,986	-		CA265_RS18125	0.42	-0.2
4,525,208	+		CA265_RS18125	0.70	+0.4
4,525,209	-		CA265_RS18125	0.70	+0.2
4,525,310	+		CA265_RS18125	0.82	+0.1
4,525,310	+		CA265_RS18125	0.82	+0.5
4,525,335	+		CA265_RS18125	0.86	+2.0
4,525,370	-				+0.6
4,525,389	-				+0.4
4,525,393	+				+1.5
4,525,394	-				-0.4
4,525,478	+				-0.0
4,525,501	-				-0.1
4,525,517	-				+1.2
4,525,541	+				-0.8
4,525,541	+				-0.3
4,525,542	-				+0.0
4,525,543	+				-0.0
4,525,544	-				+0.5
4,525,544	-				-0.3
4,525,571	-				+1.0
4,525,578	+				-0.6