Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11700

Experiment: R2A with Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.001 mg/ml
2,899,059	+		CA265_RS11690	0.71	-0.3
2,899,140	+		CA265_RS11690	0.86	-1.1
2,899,212	+				-0.2
2,899,213	-				-0.7
2,899,213	-				-1.2
2,899,213	-				-0.6
2,899,214	+				+0.4
2,899,215	-				-0.3
2,899,215	-				+0.5
2,899,215	-				+0.9
2,899,256	-				+1.5
2,899,390	+		CA265_RS11695	0.14	+0.5
2,899,444	-		CA265_RS11695	0.24	-0.1
2,899,498	+		CA265_RS11695	0.33	-1.1
2,899,600	-		CA265_RS11695	0.51	-0.7
2,899,633	+		CA265_RS11695	0.57	-0.0
2,899,726	+		CA265_RS11695	0.74	-0.1
2,899,742	+		CA265_RS11695	0.76	-0.6
2,899,742	+		CA265_RS11695	0.76	+0.3
2,899,746	+		CA265_RS11695	0.77	-0.9
2,899,747	-		CA265_RS11695	0.77	-0.3
2,899,747	-		CA265_RS11695	0.77	-0.3
2,899,784	+		CA265_RS11695	0.84	-0.6
2,899,784	+		CA265_RS11695	0.84	-0.2
2,899,784	+		CA265_RS11695	0.84	+0.1
2,899,785	-		CA265_RS11695	0.84	-0.3
2,899,792	-		CA265_RS11695	0.85	-0.6
2,899,795	-		CA265_RS11695	0.86	-1.7
2,899,795	-		CA265_RS11695	0.86	-0.7
2,899,977	+				+0.6
2,900,019	+				-0.6
2,900,029	-				-1.0
2,900,100	+		CA265_RS11700	0.11	-0.1
2,900,127	+		CA265_RS11700	0.18	+1.2
2,900,127	+		CA265_RS11700	0.18	-0.1
2,900,249	+		CA265_RS11700	0.49	-0.9
2,900,249	+		CA265_RS11700	0.49	+0.3
2,900,250	-		CA265_RS11700	0.49	+1.7
2,900,338	+		CA265_RS11700	0.71	+0.8
2,900,341	+		CA265_RS11700	0.72	-0.2
2,900,341	+		CA265_RS11700	0.72	+0.1
2,900,351	+		CA265_RS11700	0.74	+0.6
2,900,352	-		CA265_RS11700	0.75	+0.7
2,900,352	-		CA265_RS11700	0.75	+0.6
2,900,414	+				-0.0
2,900,414	+				+0.8
2,900,449	+				-0.8
2,900,492	+				+0.3
2,900,493	-				-1.2
2,900,550	+				-0.4
2,900,575	-				-0.3
2,900,591	-				+0.0
2,900,632	-				-0.3
2,900,772	+				+0.7
2,900,775	-				+0.2
2,900,793	-				-0.6
2,900,837	-		CA265_RS11705	0.14	-0.3
2,900,843	-		CA265_RS11705	0.16	-0.0
2,900,846	-		CA265_RS11705	0.16	+0.1
2,900,858	+		CA265_RS11705	0.18	-0.7
2,900,933	+		CA265_RS11705	0.31	-1.8
2,900,934	-		CA265_RS11705	0.32	-0.0
2,900,984	+		CA265_RS11705	0.40	-0.3
2,900,987	-		CA265_RS11705	0.41	+0.3
2,901,051	+		CA265_RS11705	0.52	-0.2
2,901,054	+		CA265_RS11705	0.53	+0.2
2,901,102	-		CA265_RS11705	0.61	-0.5
2,901,105	-		CA265_RS11705	0.62	-1.1
2,901,152	+		CA265_RS11705	0.70	-1.6
2,901,206	-		CA265_RS11705	0.80	-0.4
2,901,206	-		CA265_RS11705	0.80	+0.3
2,901,227	+		CA265_RS11705	0.83	-0.4
2,901,232	-		CA265_RS11705	0.84	+0.2
2,901,323	+				+0.0
2,901,339	+				+0.5
2,901,367	-				+0.0
2,901,371	-				-0.9
2,901,372	+				+0.8
2,901,373	-				-0.5
2,901,373	-				-1.0
2,901,374	+				-0.4