Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_934 and Ac3H11_935 are separated by 122 nucleotides Ac3H11_935 and Ac3H11_936 are separated by 102 nucleotides Ac3H11_936 and Ac3H11_937 are separated by 126 nucleotides
Ac3H11_934 - Cell division trigger factor (EC 5.2.1.8), at 51,429 to 52,742
_934
Ac3H11_935 - ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92), at 52,865 to 53,473
_935
Ac3H11_936 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 53,576 to 54,841
_936
Ac3H11_937 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 54,968 to 57,400
_937
Position (kb) 53
54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 52.576 kb on - strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.838 kb on + strand at 52.839 kb on - strand at 52.843 kb on + strand at 53.525 kb on + strand at 54.898 kb on + strand at 54.899 kb on - strand at 54.979 kb on + strand at 54.979 kb on + strand at 54.980 kb on - strand at 54.980 kb on - strand at 54.980 kb on - strand at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.603 kb on + strand, within Ac3H11_937 at 55.667 kb on + strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 52,576 - Ac3H11_934 0.87 -1.6 52,576 - Ac3H11_934 0.87 +1.2 52,605 + Ac3H11_934 0.89 +1.4 52,605 + Ac3H11_934 0.89 +2.2 52,605 + Ac3H11_934 0.89 +2.7 52,605 + Ac3H11_934 0.89 +0.4 52,605 + Ac3H11_934 0.89 -0.3 52,606 - Ac3H11_934 0.90 -1.8 52,606 - Ac3H11_934 0.90 +1.3 52,838 + -1.8 52,839 - -1.1 52,843 + +0.7 53,525 + -3.1 54,898 + +0.5 54,899 - +1.0 54,979 + -2.3 54,979 + -0.1 54,980 - -2.8 54,980 - -2.7 54,980 - -3.0 55,403 + Ac3H11_937 0.18 -2.0 55,403 + Ac3H11_937 0.18 -1.3 55,403 + Ac3H11_937 0.18 -1.3 55,403 + Ac3H11_937 0.18 -2.1 55,403 + Ac3H11_937 0.18 -2.3 55,404 - Ac3H11_937 0.18 -1.5 55,404 - Ac3H11_937 0.18 -1.7 55,404 - Ac3H11_937 0.18 -1.8 55,603 + Ac3H11_937 0.26 -3.4 55,667 + Ac3H11_937 0.29 -1.8 55,668 - Ac3H11_937 0.29 -2.0 55,668 - Ac3H11_937 0.29 -3.6 55,668 - Ac3H11_937 0.29 -2.5
Or see this region's nucleotide sequence