Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_904 and Ac3H11_905 are separated by 90 nucleotides Ac3H11_905 and Ac3H11_906 overlap by 4 nucleotides Ac3H11_906 and Ac3H11_907 are separated by 154 nucleotides
Ac3H11_904 - Chemotactic transducer-related protein, at 18,017 to 19,645
_904
Ac3H11_905 - Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup, at 19,736 to 20,737
_905
Ac3H11_906 - Glutathione S-transferase domain protein, at 20,734 to 21,429
_906
Ac3H11_907 - hypothetical protein, at 21,584 to 21,802
_907
Position (kb) 19
20
21 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.861 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.975 kb on + strand, within Ac3H11_904 at 19.290 kb on + strand, within Ac3H11_904 at 19.291 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.491 kb on + strand at 19.492 kb on - strand at 19.492 kb on - strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.646 kb on - strand at 19.646 kb on - strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 20.001 kb on - strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.153 kb on + strand, within Ac3H11_905 at 20.154 kb on - strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.776 kb on + strand at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.684 kb on + strand, within Ac3H11_907 at 21.684 kb on + strand, within Ac3H11_907 at 21.685 kb on - strand, within Ac3H11_907
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 18,768 + Ac3H11_904 0.46 -1.5 18,768 + Ac3H11_904 0.46 +2.1 18,768 + Ac3H11_904 0.46 +1.3 18,768 + Ac3H11_904 0.46 +0.6 18,768 + Ac3H11_904 0.46 +1.6 18,768 + Ac3H11_904 0.46 +0.8 18,768 + Ac3H11_904 0.46 +1.3 18,769 - Ac3H11_904 0.46 -2.7 18,769 - Ac3H11_904 0.46 +0.9 18,769 - Ac3H11_904 0.46 +1.3 18,769 - Ac3H11_904 0.46 -1.9 18,769 - Ac3H11_904 0.46 -1.5 18,861 + Ac3H11_904 0.52 +0.5 18,937 + Ac3H11_904 0.56 -0.6 18,937 + Ac3H11_904 0.56 +1.8 18,937 + Ac3H11_904 0.56 +0.1 18,937 + Ac3H11_904 0.56 +2.3 18,937 + Ac3H11_904 0.56 +2.6 18,938 - Ac3H11_904 0.57 -1.0 18,938 - Ac3H11_904 0.57 +0.7 18,975 + Ac3H11_904 0.59 -0.4 19,290 + Ac3H11_904 0.78 -0.4 19,291 - Ac3H11_904 0.78 +1.0 19,406 - Ac3H11_904 0.85 -0.8 19,406 - Ac3H11_904 0.85 +0.8 19,491 + -0.2 19,492 - +0.2 19,492 - -0.7 19,645 + +1.6 19,645 + -0.2 19,645 + -1.1 19,646 - -0.9 19,646 - +1.1 19,701 + -1.1 19,701 + -0.8 19,701 + +0.7 19,701 + +1.2 19,701 + -0.3 20,001 - Ac3H11_905 0.26 +0.6 20,081 + Ac3H11_905 0.34 -0.8 20,081 + Ac3H11_905 0.34 +0.7 20,081 + Ac3H11_905 0.34 -0.3 20,081 + Ac3H11_905 0.34 +2.0 20,081 + Ac3H11_905 0.34 +0.3 20,081 + Ac3H11_905 0.34 +0.4 20,081 + Ac3H11_905 0.34 -3.0 20,082 - Ac3H11_905 0.35 +0.3 20,082 - Ac3H11_905 0.35 +0.2 20,082 - Ac3H11_905 0.35 -0.8 20,082 - Ac3H11_905 0.35 +1.6 20,082 - Ac3H11_905 0.35 -0.0 20,153 + Ac3H11_905 0.42 +2.2 20,154 - Ac3H11_905 0.42 -2.4 20,354 + Ac3H11_905 0.62 -1.3 20,354 + Ac3H11_905 0.62 -0.3 20,354 + Ac3H11_905 0.62 -0.1 20,354 + Ac3H11_905 0.62 +0.2 20,354 + Ac3H11_905 0.62 +0.4 20,354 + Ac3H11_905 0.62 +1.1 20,354 + Ac3H11_905 0.62 +0.3 20,354 + Ac3H11_905 0.62 -1.5 20,354 + Ac3H11_905 0.62 -0.9 20,354 + Ac3H11_905 0.62 -3.3 20,354 + Ac3H11_905 0.62 -0.8 20,355 - Ac3H11_905 0.62 -0.0 20,355 - Ac3H11_905 0.62 -2.3 20,355 - Ac3H11_905 0.62 +1.0 20,355 - Ac3H11_905 0.62 -2.3 20,355 - Ac3H11_905 0.62 +1.8 20,355 - Ac3H11_905 0.62 -1.2 20,355 - Ac3H11_905 0.62 +0.1 20,355 - Ac3H11_905 0.62 -2.0 20,381 + Ac3H11_905 0.64 -4.2 20,381 + Ac3H11_905 0.64 +0.0 20,381 + Ac3H11_905 0.64 +1.5 20,381 + Ac3H11_905 0.64 -1.3 20,382 - Ac3H11_905 0.64 +0.2 20,382 - Ac3H11_905 0.64 +1.9 20,540 + Ac3H11_905 0.80 +0.9 20,540 + Ac3H11_905 0.80 +1.6 20,540 + Ac3H11_905 0.80 -0.9 20,541 - Ac3H11_905 0.80 +1.5 20,541 - Ac3H11_905 0.80 -1.6 20,541 - Ac3H11_905 0.80 +2.0 20,541 - Ac3H11_905 0.80 +1.6 20,541 - Ac3H11_905 0.80 -0.7 20,755 + +0.8 20,755 + -3.7 20,755 + +1.2 20,755 + -3.6 20,755 + +1.0 20,756 - -1.6 20,756 - -1.0 20,756 - -0.6 20,776 + -0.2 21,069 + Ac3H11_906 0.48 +0.0 21,069 + Ac3H11_906 0.48 +0.1 21,069 + Ac3H11_906 0.48 +0.6 21,069 + Ac3H11_906 0.48 +0.5 21,069 + Ac3H11_906 0.48 +0.3 21,069 + Ac3H11_906 0.48 -3.2 21,069 + Ac3H11_906 0.48 +0.3 21,069 + Ac3H11_906 0.48 +0.0 21,069 + Ac3H11_906 0.48 -0.4 21,069 + Ac3H11_906 0.48 -1.2 21,070 - Ac3H11_906 0.48 +0.2 21,070 - Ac3H11_906 0.48 +0.9 21,070 - Ac3H11_906 0.48 +0.8 21,070 - Ac3H11_906 0.48 -0.1 21,070 - Ac3H11_906 0.48 +0.6 21,070 - Ac3H11_906 0.48 -0.1 21,070 - Ac3H11_906 0.48 +1.5 21,684 + Ac3H11_907 0.46 -2.4 21,684 + Ac3H11_907 0.46 -1.7 21,685 - Ac3H11_907 0.46 +0.6
Or see this region's nucleotide sequence