Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_900
Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
10,429 | + | Ac3H11_899 | 0.61 | +2.1 | |
10,429 | + | Ac3H11_899 | 0.61 | +1.8 | |
10,429 | + | Ac3H11_899 | 0.61 | +1.3 | |
10,429 | + | Ac3H11_899 | 0.61 | +0.7 | |
10,430 | - | Ac3H11_899 | 0.61 | +1.5 | |
10,430 | - | Ac3H11_899 | 0.61 | +0.0 | |
10,591 | + | Ac3H11_899 | 0.69 | +0.4 | |
10,592 | - | Ac3H11_899 | 0.69 | +0.6 | |
10,592 | - | Ac3H11_899 | 0.69 | +0.9 | |
10,592 | - | Ac3H11_899 | 0.69 | +0.3 | |
10,792 | + | Ac3H11_899 | 0.79 | +1.6 | |
10,792 | + | Ac3H11_899 | 0.79 | +1.6 | |
10,792 | + | Ac3H11_899 | 0.79 | +1.6 | |
10,792 | + | Ac3H11_899 | 0.79 | -0.8 | |
10,823 | - | Ac3H11_899 | 0.80 | -1.9 | |
11,222 | + | -0.4 | |||
11,222 | + | +0.3 | |||
11,222 | + | -0.2 | |||
11,222 | + | +2.1 | |||
11,222 | + | +0.5 | |||
11,222 | + | -0.0 | |||
11,223 | - | -1.8 | |||
12,669 | - | +1.4 | |||
12,907 | + | -2.0 | |||
13,387 | + | Ac3H11_901 | 0.64 | +2.4 | |
13,387 | + | Ac3H11_901 | 0.64 | -0.3 |
Or see this region's nucleotide sequence