Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_381 and Ac3H11_566 are separated by 178 nucleotides Ac3H11_566 and Ac3H11_382 are separated by 194 nucleotides
Ac3H11_381 - Integrase, at 57,558 to 58,805
_381
Ac3H11_566 - tRNA-Arg-TCT, at 58,984 to 59,057
_566
Ac3H11_382 - TrkA-N:Sodium/hydrogen exchanger, at 59,252 to 60,991
_382
Position (kb)
58
59
60 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 58.018 kb on - strand, within Ac3H11_381 at 58.018 kb on - strand, within Ac3H11_381 at 58.132 kb on + strand, within Ac3H11_381 at 58.132 kb on + strand, within Ac3H11_381 at 58.132 kb on + strand, within Ac3H11_381 at 58.132 kb on + strand, within Ac3H11_381 at 58.133 kb on - strand, within Ac3H11_381 at 58.133 kb on - strand, within Ac3H11_381 at 58.149 kb on + strand, within Ac3H11_381 at 58.150 kb on - strand, within Ac3H11_381 at 58.205 kb on + strand, within Ac3H11_381 at 58.206 kb on - strand, within Ac3H11_381 at 58.336 kb on - strand, within Ac3H11_381 at 58.336 kb on - strand, within Ac3H11_381 at 58.336 kb on - strand, within Ac3H11_381 at 58.399 kb on + strand, within Ac3H11_381 at 58.400 kb on - strand, within Ac3H11_381 at 58.429 kb on - strand, within Ac3H11_381 at 58.429 kb on - strand, within Ac3H11_381 at 58.444 kb on + strand, within Ac3H11_381 at 58.445 kb on - strand, within Ac3H11_381 at 58.518 kb on + strand, within Ac3H11_381 at 58.518 kb on + strand, within Ac3H11_381 at 58.519 kb on - strand, within Ac3H11_381 at 58.519 kb on - strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.633 kb on + strand, within Ac3H11_381 at 58.675 kb on + strand, within Ac3H11_381 at 58.675 kb on + strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.690 kb on + strand at 58.690 kb on + strand at 58.690 kb on + strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.718 kb on - strand at 58.718 kb on - strand at 58.782 kb on + strand at 58.782 kb on + strand at 58.796 kb on + strand at 58.823 kb on + strand at 58.877 kb on + strand at 58.877 kb on + strand at 58.877 kb on + strand at 58.878 kb on - strand at 58.933 kb on - strand at 58.977 kb on + strand at 58.977 kb on + strand at 58.978 kb on - strand at 59.081 kb on - strand at 59.197 kb on - strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.199 kb on - strand at 59.199 kb on - strand at 59.357 kb on + strand at 59.560 kb on + strand, within Ac3H11_382 at 59.560 kb on + strand, within Ac3H11_382 at 59.561 kb on - strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 58,018 - Ac3H11_381 0.37 +0.9 58,018 - Ac3H11_381 0.37 -0.4 58,132 + Ac3H11_381 0.46 +0.4 58,132 + Ac3H11_381 0.46 -1.2 58,132 + Ac3H11_381 0.46 -1.2 58,132 + Ac3H11_381 0.46 +1.0 58,133 - Ac3H11_381 0.46 -1.3 58,133 - Ac3H11_381 0.46 -1.7 58,149 + Ac3H11_381 0.47 +0.7 58,150 - Ac3H11_381 0.47 +0.7 58,205 + Ac3H11_381 0.52 -4.6 58,206 - Ac3H11_381 0.52 -0.6 58,336 - Ac3H11_381 0.62 +0.5 58,336 - Ac3H11_381 0.62 +0.7 58,336 - Ac3H11_381 0.62 +0.0 58,399 + Ac3H11_381 0.67 +0.1 58,400 - Ac3H11_381 0.67 -2.5 58,429 - Ac3H11_381 0.70 +2.8 58,429 - Ac3H11_381 0.70 +1.1 58,444 + Ac3H11_381 0.71 +0.2 58,445 - Ac3H11_381 0.71 +0.1 58,518 + Ac3H11_381 0.77 -3.4 58,518 + Ac3H11_381 0.77 +0.4 58,519 - Ac3H11_381 0.77 -2.6 58,519 - Ac3H11_381 0.77 -1.3 58,563 + Ac3H11_381 0.81 +1.9 58,563 + Ac3H11_381 0.81 -2.5 58,563 + Ac3H11_381 0.81 +0.9 58,564 - Ac3H11_381 0.81 -1.9 58,564 - Ac3H11_381 0.81 -0.9 58,564 - Ac3H11_381 0.81 -0.7 58,564 - Ac3H11_381 0.81 -1.6 58,564 - Ac3H11_381 0.81 -3.0 58,564 - Ac3H11_381 0.81 +0.6 58,564 - Ac3H11_381 0.81 -1.7 58,564 - Ac3H11_381 0.81 -0.1 58,633 + Ac3H11_381 0.86 +1.7 58,675 + Ac3H11_381 0.90 +1.2 58,675 + Ac3H11_381 0.90 +0.4 58,676 - Ac3H11_381 0.90 +1.6 58,676 - Ac3H11_381 0.90 -1.2 58,676 - Ac3H11_381 0.90 -3.2 58,676 - Ac3H11_381 0.90 -0.9 58,690 + +3.0 58,690 + -1.3 58,690 + +0.9 58,691 - -2.3 58,691 - +0.6 58,691 - +0.8 58,691 - +1.7 58,691 - +1.2 58,691 - -3.1 58,691 - -1.1 58,718 - +1.5 58,718 - +1.2 58,782 + -2.7 58,782 + -1.9 58,796 + +1.3 58,823 + -3.1 58,877 + -1.5 58,877 + +0.4 58,877 + +0.8 58,878 - -2.9 58,933 - -0.1 58,977 + -1.0 58,977 + -0.3 58,978 - -2.2 59,081 - -0.2 59,197 - +1.8 59,198 + -0.5 59,198 + +0.8 59,198 + -0.1 59,198 + -2.7 59,199 - +0.7 59,199 - -0.4 59,357 + +0.6 59,560 + Ac3H11_382 0.18 -1.1 59,560 + Ac3H11_382 0.18 -0.8 59,561 - Ac3H11_382 0.18 -0.4 59,684 + Ac3H11_382 0.25 -0.1 59,684 + Ac3H11_382 0.25 -3.0 59,684 + Ac3H11_382 0.25 +0.3 59,684 + Ac3H11_382 0.25 +0.2 59,684 + Ac3H11_382 0.25 -1.1 59,684 + Ac3H11_382 0.25 -2.9 59,684 + Ac3H11_382 0.25 +0.0 59,685 - Ac3H11_382 0.25 +0.5 59,685 - Ac3H11_382 0.25 -1.1 59,685 - Ac3H11_382 0.25 -2.8 59,685 - Ac3H11_382 0.25 -1.9 59,685 - Ac3H11_382 0.25 +1.2 59,685 - Ac3H11_382 0.25 +0.1 59,685 - Ac3H11_382 0.25 -2.7
Or see this region's nucleotide sequence