Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4731 and Ac3H11_4732 are separated by 82 nucleotides Ac3H11_4732 and Ac3H11_4733 are separated by 175 nucleotides Ac3H11_4733 and Ac3H11_4734 are separated by 88 nucleotides Ac3H11_4734 and Ac3H11_4735 are separated by 249 nucleotides
Ac3H11_4731 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 39,220 to 39,882
_4731
Ac3H11_4732 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 39,965 to 40,705
_4732
Ac3H11_4733 - Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-), at 40,881 to 41,633
_4733
Ac3H11_4734 - hypothetical protein, at 41,722 to 42,270
_4734
Ac3H11_4735 - Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19), at 42,520 to 42,909
_4735
Position (kb) 40
41
42 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 42.017 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.068 kb on - strand, within Ac3H11_4734 at 42.196 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.268 kb on + strand at 42.273 kb on - strand at 42.273 kb on - strand at 42.312 kb on + strand at 42.312 kb on + strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.316 kb on + strand at 42.317 kb on - strand at 42.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 42,017 + Ac3H11_4734 0.54 -1.2 42,067 + Ac3H11_4734 0.63 -0.2 42,067 + Ac3H11_4734 0.63 +0.5 42,067 + Ac3H11_4734 0.63 -0.4 42,067 + Ac3H11_4734 0.63 +0.2 42,068 - Ac3H11_4734 0.63 +0.6 42,196 + Ac3H11_4734 0.86 +0.6 42,214 + Ac3H11_4734 0.90 -2.2 42,214 + Ac3H11_4734 0.90 +1.6 42,214 + Ac3H11_4734 0.90 +0.7 42,214 + Ac3H11_4734 0.90 -1.2 42,214 + Ac3H11_4734 0.90 -2.9 42,214 + Ac3H11_4734 0.90 -0.7 42,214 + Ac3H11_4734 0.90 +1.5 42,215 - Ac3H11_4734 0.90 -0.1 42,215 - Ac3H11_4734 0.90 +0.7 42,215 - Ac3H11_4734 0.90 +1.1 42,268 + -1.1 42,273 - +0.2 42,273 - +0.4 42,312 + +1.4 42,312 + +1.2 42,313 - -0.7 42,313 - +0.9 42,313 - -1.6 42,316 + +1.6 42,317 - -1.8 42,317 - -0.6
Or see this region's nucleotide sequence