Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3945 and Ac3H11_3946 overlap by 1 nucleotides Ac3H11_3946 and Ac3H11_3947 overlap by 20 nucleotides Ac3H11_3947 and Ac3H11_3948 overlap by 105 nucleotides
Ac3H11_3945 - Sensory histidine kinase QseC, at 167,801 to 169,138
_3945
Ac3H11_3946 - Two-component system response regulator QseB, at 169,138 to 169,797
_3946
Ac3H11_3947 - hypothetical protein, at 169,778 to 169,900
_3947
Ac3H11_3948 - Ferrichrome-iron receptor, at 169,796 to 172,105
_3948
Position (kb) 169
170 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 168.982 kb on - strand, within Ac3H11_3945 at 168.982 kb on - strand, within Ac3H11_3945 at 169.220 kb on + strand, within Ac3H11_3946 at 169.220 kb on + strand, within Ac3H11_3946 at 169.220 kb on + strand, within Ac3H11_3946 at 169.221 kb on - strand, within Ac3H11_3946 at 169.221 kb on - strand, within Ac3H11_3946 at 169.418 kb on + strand, within Ac3H11_3946 at 169.419 kb on - strand, within Ac3H11_3946 at 169.505 kb on + strand, within Ac3H11_3946 at 169.506 kb on - strand, within Ac3H11_3946 at 169.506 kb on - strand, within Ac3H11_3946 at 169.665 kb on - strand, within Ac3H11_3946 at 169.724 kb on + strand, within Ac3H11_3946 at 169.725 kb on - strand, within Ac3H11_3946 at 169.809 kb on - strand at 169.809 kb on - strand at 169.913 kb on + strand at 170.234 kb on - strand, within Ac3H11_3948 at 170.285 kb on + strand, within Ac3H11_3948 at 170.285 kb on + strand, within Ac3H11_3948 at 170.286 kb on - strand, within Ac3H11_3948 at 170.286 kb on - strand, within Ac3H11_3948 at 170.286 kb on - strand, within Ac3H11_3948 at 170.327 kb on + strand, within Ac3H11_3948 at 170.357 kb on + strand, within Ac3H11_3948 at 170.358 kb on - strand, within Ac3H11_3948 at 170.358 kb on - strand, within Ac3H11_3948 at 170.358 kb on - strand, within Ac3H11_3948 at 170.375 kb on + strand, within Ac3H11_3948 at 170.426 kb on + strand, within Ac3H11_3948 at 170.426 kb on + strand, within Ac3H11_3948 at 170.426 kb on + strand, within Ac3H11_3948 at 170.427 kb on - strand, within Ac3H11_3948 at 170.459 kb on + strand, within Ac3H11_3948 at 170.459 kb on + strand, within Ac3H11_3948 at 170.459 kb on + strand, within Ac3H11_3948 at 170.459 kb on + strand, within Ac3H11_3948 at 170.459 kb on + strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.460 kb on - strand, within Ac3H11_3948 at 170.520 kb on + strand, within Ac3H11_3948
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 168,982 - Ac3H11_3945 0.88 +0.5 168,982 - Ac3H11_3945 0.88 +1.2 169,220 + Ac3H11_3946 0.12 -0.8 169,220 + Ac3H11_3946 0.12 -1.2 169,220 + Ac3H11_3946 0.12 -0.8 169,221 - Ac3H11_3946 0.13 -0.3 169,221 - Ac3H11_3946 0.13 +0.7 169,418 + Ac3H11_3946 0.42 +0.3 169,419 - Ac3H11_3946 0.43 +0.5 169,505 + Ac3H11_3946 0.56 -0.8 169,506 - Ac3H11_3946 0.56 -2.1 169,506 - Ac3H11_3946 0.56 -1.1 169,665 - Ac3H11_3946 0.80 -0.3 169,724 + Ac3H11_3946 0.89 +1.1 169,725 - Ac3H11_3946 0.89 -0.2 169,809 - +0.6 169,809 - +0.6 169,913 + -3.0 170,234 - Ac3H11_3948 0.19 +1.1 170,285 + Ac3H11_3948 0.21 +1.7 170,285 + Ac3H11_3948 0.21 -3.1 170,286 - Ac3H11_3948 0.21 +1.2 170,286 - Ac3H11_3948 0.21 -0.8 170,286 - Ac3H11_3948 0.21 +2.9 170,327 + Ac3H11_3948 0.23 -1.4 170,357 + Ac3H11_3948 0.24 -1.2 170,358 - Ac3H11_3948 0.24 -0.8 170,358 - Ac3H11_3948 0.24 -2.5 170,358 - Ac3H11_3948 0.24 +0.4 170,375 + Ac3H11_3948 0.25 +2.6 170,426 + Ac3H11_3948 0.27 -1.9 170,426 + Ac3H11_3948 0.27 -0.4 170,426 + Ac3H11_3948 0.27 -3.4 170,427 - Ac3H11_3948 0.27 -1.2 170,459 + Ac3H11_3948 0.29 +0.9 170,459 + Ac3H11_3948 0.29 -0.7 170,459 + Ac3H11_3948 0.29 +1.0 170,459 + Ac3H11_3948 0.29 -0.8 170,459 + Ac3H11_3948 0.29 -3.3 170,460 - Ac3H11_3948 0.29 -1.1 170,460 - Ac3H11_3948 0.29 -0.4 170,460 - Ac3H11_3948 0.29 -1.1 170,460 - Ac3H11_3948 0.29 -0.7 170,460 - Ac3H11_3948 0.29 +2.2 170,460 - Ac3H11_3948 0.29 -1.6 170,460 - Ac3H11_3948 0.29 -0.8 170,460 - Ac3H11_3948 0.29 +0.1 170,460 - Ac3H11_3948 0.29 -0.8 170,520 + Ac3H11_3948 0.31 +2.1
Or see this region's nucleotide sequence