Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3763 and Ac3H11_3764 are separated by 21 nucleotides Ac3H11_3764 and Ac3H11_3765 are separated by 50 nucleotides Ac3H11_3765 and Ac3H11_3766 overlap by 4 nucleotides Ac3H11_3766 and Ac3H11_3767 are separated by 2 nucleotides
Ac3H11_3763 - Phage transposase, at 15,162 to 16,940
_3763
Ac3H11_3764 - Phage protein, at 16,962 to 17,843
_3764
Ac3H11_3765 - Transcriptional regulator, IclR family, at 17,894 to 18,232
_3765
Ac3H11_3766 - hypothetical protein, at 18,229 to 18,477
_3766
Ac3H11_3767 - phage-related hypothetical protein, at 18,480 to 18,950
_3767
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.343 kb on + strand, within Ac3H11_3763 at 16.433 kb on - strand, within Ac3H11_3763 at 16.540 kb on + strand, within Ac3H11_3763 at 16.541 kb on - strand, within Ac3H11_3763 at 16.852 kb on + strand at 16.852 kb on + strand at 16.963 kb on + strand at 17.124 kb on + strand, within Ac3H11_3764 at 17.246 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.847 kb on + strand at 17.847 kb on + strand at 18.064 kb on + strand, within Ac3H11_3765 at 18.190 kb on + strand, within Ac3H11_3765 at 18.529 kb on + strand, within Ac3H11_3767 at 18.601 kb on + strand, within Ac3H11_3767 at 18.736 kb on + strand, within Ac3H11_3767 at 18.736 kb on + strand, within Ac3H11_3767
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 16,276 + Ac3H11_3763 0.63 +0.4 16,276 + Ac3H11_3763 0.63 +0.9 16,276 + Ac3H11_3763 0.63 -2.3 16,343 + Ac3H11_3763 0.66 +0.7 16,433 - Ac3H11_3763 0.71 +2.7 16,540 + Ac3H11_3763 0.77 +0.3 16,541 - Ac3H11_3763 0.78 +2.3 16,852 + -3.0 16,852 + +1.7 16,963 + +3.7 17,124 + Ac3H11_3764 0.18 -2.6 17,246 + Ac3H11_3764 0.32 +1.6 17,736 + Ac3H11_3764 0.88 -2.5 17,736 + Ac3H11_3764 0.88 +0.5 17,736 + Ac3H11_3764 0.88 +1.0 17,736 + Ac3H11_3764 0.88 -1.6 17,737 - Ac3H11_3764 0.88 -1.9 17,737 - Ac3H11_3764 0.88 -1.0 17,847 + -1.5 17,847 + -0.3 18,064 + Ac3H11_3765 0.50 +1.1 18,190 + Ac3H11_3765 0.87 -1.6 18,529 + Ac3H11_3767 0.10 -2.3 18,601 + Ac3H11_3767 0.26 -1.3 18,736 + Ac3H11_3767 0.54 -0.5 18,736 + Ac3H11_3767 0.54 -2.3
Or see this region's nucleotide sequence