Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3218 and Ac3H11_3219 are separated by 310 nucleotides Ac3H11_3219 and Ac3H11_3220 are separated by 54 nucleotides
Ac3H11_3218 - Response regulator NasT, at 126,866 to 127,504
_3218
Ac3H11_3219 - hypothetical protein, at 127,815 to 127,949
_3219
Ac3H11_3220 - Nitrate ABC transporter, nitrate-binding protein, at 128,004 to 129,248
_3220
Position (kb) 127
128 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 126.877 kb on + strand at 126.878 kb on - strand at 126.878 kb on - strand at 127.223 kb on + strand, within Ac3H11_3218 at 127.223 kb on + strand, within Ac3H11_3218 at 127.224 kb on - strand, within Ac3H11_3218 at 127.502 kb on + strand at 127.982 kb on + strand at 127.982 kb on + strand at 127.983 kb on - strand at 127.983 kb on - strand at 128.214 kb on + strand, within Ac3H11_3220 at 128.215 kb on - strand, within Ac3H11_3220 at 128.215 kb on - strand, within Ac3H11_3220 at 128.308 kb on - strand, within Ac3H11_3220 at 128.319 kb on + strand, within Ac3H11_3220 at 128.320 kb on - strand, within Ac3H11_3220 at 128.320 kb on - strand, within Ac3H11_3220 at 128.481 kb on + strand, within Ac3H11_3220 at 128.481 kb on + strand, within Ac3H11_3220 at 128.481 kb on + strand, within Ac3H11_3220 at 128.481 kb on + strand, within Ac3H11_3220 at 128.481 kb on + strand, within Ac3H11_3220 at 128.482 kb on - strand, within Ac3H11_3220 at 128.482 kb on - strand, within Ac3H11_3220 at 128.482 kb on - strand, within Ac3H11_3220 at 128.482 kb on - strand, within Ac3H11_3220 at 128.482 kb on - strand, within Ac3H11_3220 at 128.532 kb on + strand, within Ac3H11_3220 at 128.532 kb on + strand, within Ac3H11_3220 at 128.532 kb on + strand, within Ac3H11_3220 at 128.533 kb on - strand, within Ac3H11_3220 at 128.533 kb on - strand, within Ac3H11_3220 at 128.880 kb on + strand, within Ac3H11_3220 at 128.880 kb on + strand, within Ac3H11_3220 at 128.880 kb on + strand, within Ac3H11_3220 at 128.880 kb on + strand, within Ac3H11_3220 at 128.881 kb on - strand, within Ac3H11_3220 at 128.881 kb on - strand, within Ac3H11_3220 at 128.881 kb on - strand, within Ac3H11_3220 at 128.881 kb on - strand, within Ac3H11_3220
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 126,877 + -0.1 126,878 - -1.6 126,878 - -0.8 127,223 + Ac3H11_3218 0.56 -2.0 127,223 + Ac3H11_3218 0.56 -1.3 127,224 - Ac3H11_3218 0.56 +0.6 127,502 + -1.0 127,982 + -1.1 127,982 + +0.1 127,983 - -1.1 127,983 - -2.6 128,214 + Ac3H11_3220 0.17 +0.9 128,215 - Ac3H11_3220 0.17 -3.6 128,215 - Ac3H11_3220 0.17 -1.5 128,308 - Ac3H11_3220 0.24 -2.3 128,319 + Ac3H11_3220 0.25 +0.8 128,320 - Ac3H11_3220 0.25 -2.4 128,320 - Ac3H11_3220 0.25 -0.3 128,481 + Ac3H11_3220 0.38 +0.6 128,481 + Ac3H11_3220 0.38 -0.8 128,481 + Ac3H11_3220 0.38 -0.0 128,481 + Ac3H11_3220 0.38 -1.4 128,481 + Ac3H11_3220 0.38 -1.9 128,482 - Ac3H11_3220 0.38 +1.4 128,482 - Ac3H11_3220 0.38 -0.4 128,482 - Ac3H11_3220 0.38 +1.4 128,482 - Ac3H11_3220 0.38 +0.3 128,482 - Ac3H11_3220 0.38 -2.8 128,532 + Ac3H11_3220 0.42 +0.7 128,532 + Ac3H11_3220 0.42 -1.1 128,532 + Ac3H11_3220 0.42 -1.3 128,533 - Ac3H11_3220 0.42 -3.0 128,533 - Ac3H11_3220 0.42 +2.4 128,880 + Ac3H11_3220 0.70 +0.0 128,880 + Ac3H11_3220 0.70 -0.9 128,880 + Ac3H11_3220 0.70 -0.9 128,880 + Ac3H11_3220 0.70 +2.6 128,881 - Ac3H11_3220 0.70 -0.2 128,881 - Ac3H11_3220 0.70 +0.1 128,881 - Ac3H11_3220 0.70 +0.7 128,881 - Ac3H11_3220 0.70 +1.2
Or see this region's nucleotide sequence