Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2485 and Ac3H11_2486 are separated by 184 nucleotides Ac3H11_2486 and Ac3H11_2487 are separated by 28 nucleotides Ac3H11_2487 and Ac3H11_2488 overlap by 4 nucleotides
Ac3H11_2485 - tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins, at 751,609 to 752,928
_2485
Ac3H11_2486 - Lipid A export ATP-binding/permease protein MsbA, at 753,113 to 754,915
_2486
Ac3H11_2487 - Ankyrin, at 754,944 to 755,618
_2487
Ac3H11_2488 - Putative deoxyribonuclease YcfH, at 755,615 to 756,421
_2488
Position (kb) 753
754
755 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 752.977 kb on + strand at 752.977 kb on + strand at 752.978 kb on - strand at 752.978 kb on - strand at 752.978 kb on - strand at 752.978 kb on - strand at 752.990 kb on - strand at 752.990 kb on - strand at 753.038 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.098 kb on + strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 753.099 kb on - strand at 754.914 kb on - strand at 754.914 kb on - strand at 754.934 kb on + strand at 754.934 kb on + strand at 754.934 kb on + strand at 754.934 kb on + strand at 754.935 kb on - strand at 754.945 kb on + strand at 754.946 kb on - strand at 754.946 kb on - strand at 755.066 kb on + strand, within Ac3H11_2487 at 755.066 kb on + strand, within Ac3H11_2487 at 755.067 kb on - strand, within Ac3H11_2487 at 755.067 kb on - strand, within Ac3H11_2487 at 755.086 kb on - strand, within Ac3H11_2487 at 755.086 kb on - strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.116 kb on + strand, within Ac3H11_2487 at 755.117 kb on - strand, within Ac3H11_2487 at 755.117 kb on - strand, within Ac3H11_2487 at 755.117 kb on - strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.170 kb on + strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.171 kb on - strand, within Ac3H11_2487 at 755.236 kb on + strand, within Ac3H11_2487 at 755.236 kb on + strand, within Ac3H11_2487 at 755.237 kb on - strand, within Ac3H11_2487 at 755.385 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.542 kb on + strand, within Ac3H11_2487 at 755.543 kb on - strand, within Ac3H11_2487 at 755.543 kb on - strand, within Ac3H11_2487 at 755.543 kb on - strand, within Ac3H11_2487 at 755.543 kb on - strand, within Ac3H11_2487 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.727 kb on + strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.728 kb on - strand, within Ac3H11_2488 at 755.772 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.797 kb on + strand, within Ac3H11_2488 at 755.798 kb on - strand, within Ac3H11_2488 at 755.798 kb on - strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.877 kb on + strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.878 kb on - strand, within Ac3H11_2488 at 755.880 kb on + strand, within Ac3H11_2488 at 755.880 kb on + strand, within Ac3H11_2488 at 755.881 kb on - strand, within Ac3H11_2488 at 755.881 kb on - strand, within Ac3H11_2488 at 755.881 kb on - strand, within Ac3H11_2488 at 755.881 kb on - strand, within Ac3H11_2488
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 752,977 + -1.2 752,977 + -2.2 752,978 - +1.4 752,978 - -3.8 752,978 - +2.2 752,978 - +1.1 752,990 - -0.1 752,990 - +1.6 753,038 + -1.3 753,098 + -2.1 753,098 + -0.6 753,098 + +1.3 753,098 + -1.1 753,098 + -1.0 753,098 + -0.5 753,098 + +0.6 753,098 + -0.3 753,098 + +0.2 753,098 + +0.9 753,099 - -2.9 753,099 - -0.4 753,099 - -0.9 753,099 - -0.9 753,099 - -0.2 753,099 - -1.3 753,099 - -0.4 753,099 - -1.6 753,099 - +0.1 753,099 - +0.1 753,099 - +0.6 753,099 - -1.2 754,914 - +0.9 754,914 - -0.5 754,934 + +1.3 754,934 + -0.4 754,934 + -3.1 754,934 + -0.5 754,935 - -0.7 754,945 + -3.1 754,946 - -2.3 754,946 - +1.8 755,066 + Ac3H11_2487 0.18 -1.5 755,066 + Ac3H11_2487 0.18 +0.7 755,067 - Ac3H11_2487 0.18 +0.6 755,067 - Ac3H11_2487 0.18 +0.7 755,086 - Ac3H11_2487 0.21 -3.6 755,086 - Ac3H11_2487 0.21 -0.3 755,116 + Ac3H11_2487 0.25 +0.7 755,116 + Ac3H11_2487 0.25 +0.8 755,116 + Ac3H11_2487 0.25 -2.9 755,116 + Ac3H11_2487 0.25 -0.1 755,116 + Ac3H11_2487 0.25 +2.5 755,116 + Ac3H11_2487 0.25 -0.7 755,117 - Ac3H11_2487 0.26 -0.8 755,117 - Ac3H11_2487 0.26 +1.1 755,117 - Ac3H11_2487 0.26 +1.6 755,170 + Ac3H11_2487 0.33 -1.0 755,170 + Ac3H11_2487 0.33 +0.3 755,170 + Ac3H11_2487 0.33 -2.1 755,170 + Ac3H11_2487 0.33 +0.6 755,170 + Ac3H11_2487 0.33 -1.5 755,170 + Ac3H11_2487 0.33 -0.1 755,170 + Ac3H11_2487 0.33 -1.6 755,170 + Ac3H11_2487 0.33 -0.0 755,171 - Ac3H11_2487 0.34 +0.9 755,171 - Ac3H11_2487 0.34 +1.8 755,171 - Ac3H11_2487 0.34 -0.6 755,171 - Ac3H11_2487 0.34 -0.2 755,171 - Ac3H11_2487 0.34 -0.4 755,171 - Ac3H11_2487 0.34 -1.9 755,171 - Ac3H11_2487 0.34 +1.2 755,171 - Ac3H11_2487 0.34 +0.7 755,171 - Ac3H11_2487 0.34 -0.7 755,171 - Ac3H11_2487 0.34 -2.7 755,171 - Ac3H11_2487 0.34 +0.5 755,171 - Ac3H11_2487 0.34 -1.5 755,236 + Ac3H11_2487 0.43 +0.6 755,236 + Ac3H11_2487 0.43 +0.8 755,237 - Ac3H11_2487 0.43 -0.2 755,385 + Ac3H11_2487 0.65 -0.3 755,542 + Ac3H11_2487 0.89 -1.3 755,542 + Ac3H11_2487 0.89 -3.2 755,542 + Ac3H11_2487 0.89 +0.0 755,542 + Ac3H11_2487 0.89 +1.5 755,542 + Ac3H11_2487 0.89 +1.0 755,542 + Ac3H11_2487 0.89 +0.6 755,542 + Ac3H11_2487 0.89 +2.0 755,543 - Ac3H11_2487 0.89 -0.4 755,543 - Ac3H11_2487 0.89 -1.6 755,543 - Ac3H11_2487 0.89 -2.9 755,543 - Ac3H11_2487 0.89 -0.9 755,727 + Ac3H11_2488 0.14 -0.8 755,727 + Ac3H11_2488 0.14 -0.3 755,727 + Ac3H11_2488 0.14 +1.7 755,727 + Ac3H11_2488 0.14 -2.6 755,727 + Ac3H11_2488 0.14 +2.3 755,727 + Ac3H11_2488 0.14 +0.0 755,727 + Ac3H11_2488 0.14 -1.1 755,727 + Ac3H11_2488 0.14 -0.7 755,727 + Ac3H11_2488 0.14 -2.7 755,727 + Ac3H11_2488 0.14 +1.7 755,727 + Ac3H11_2488 0.14 -0.9 755,728 - Ac3H11_2488 0.14 +1.5 755,728 - Ac3H11_2488 0.14 -0.5 755,728 - Ac3H11_2488 0.14 -1.5 755,728 - Ac3H11_2488 0.14 -2.6 755,728 - Ac3H11_2488 0.14 +1.3 755,728 - Ac3H11_2488 0.14 +1.1 755,728 - Ac3H11_2488 0.14 -0.5 755,772 + Ac3H11_2488 0.19 -1.7 755,797 + Ac3H11_2488 0.23 -2.4 755,797 + Ac3H11_2488 0.23 -0.3 755,797 + Ac3H11_2488 0.23 -1.9 755,797 + Ac3H11_2488 0.23 +1.7 755,797 + Ac3H11_2488 0.23 +1.3 755,797 + Ac3H11_2488 0.23 +4.7 755,797 + Ac3H11_2488 0.23 +1.8 755,797 + Ac3H11_2488 0.23 -0.8 755,797 + Ac3H11_2488 0.23 -2.5 755,798 - Ac3H11_2488 0.23 +2.1 755,798 - Ac3H11_2488 0.23 +1.9 755,877 + Ac3H11_2488 0.32 +0.1 755,877 + Ac3H11_2488 0.32 -1.8 755,877 + Ac3H11_2488 0.32 -0.3 755,877 + Ac3H11_2488 0.32 +1.3 755,877 + Ac3H11_2488 0.32 +1.9 755,877 + Ac3H11_2488 0.32 -0.9 755,877 + Ac3H11_2488 0.32 -3.2 755,877 + Ac3H11_2488 0.32 -2.6 755,877 + Ac3H11_2488 0.32 +0.0 755,877 + Ac3H11_2488 0.32 -1.5 755,877 + Ac3H11_2488 0.32 -2.8 755,877 + Ac3H11_2488 0.32 -0.6 755,877 + Ac3H11_2488 0.32 +0.7 755,877 + Ac3H11_2488 0.32 +0.9 755,877 + Ac3H11_2488 0.32 -2.3 755,877 + Ac3H11_2488 0.32 -1.8 755,877 + Ac3H11_2488 0.32 -0.8 755,877 + Ac3H11_2488 0.32 -1.7 755,878 - Ac3H11_2488 0.33 -2.5 755,878 - Ac3H11_2488 0.33 -1.4 755,878 - Ac3H11_2488 0.33 -1.9 755,878 - Ac3H11_2488 0.33 -2.8 755,878 - Ac3H11_2488 0.33 -1.9 755,878 - Ac3H11_2488 0.33 -0.8 755,878 - Ac3H11_2488 0.33 -2.4 755,878 - Ac3H11_2488 0.33 -0.1 755,878 - Ac3H11_2488 0.33 +0.2 755,878 - Ac3H11_2488 0.33 -1.5 755,878 - Ac3H11_2488 0.33 +1.1 755,878 - Ac3H11_2488 0.33 -1.6 755,878 - Ac3H11_2488 0.33 -0.8 755,878 - Ac3H11_2488 0.33 -2.7 755,878 - +0.5 755,878 - Ac3H11_2488 0.33 -0.4 755,878 - Ac3H11_2488 0.33 +0.1 755,878 - Ac3H11_2488 0.33 +0.1 755,878 - Ac3H11_2488 0.33 -0.4 755,880 + Ac3H11_2488 0.33 -2.2 755,880 + Ac3H11_2488 0.33 -1.1 755,881 - Ac3H11_2488 0.33 +1.1 755,881 - Ac3H11_2488 0.33 -0.6 755,881 - Ac3H11_2488 0.33 -2.2 755,881 - Ac3H11_2488 0.33 -2.1
Or see this region's nucleotide sequence