Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_204 and Ac3H11_205 overlap by 8 nucleotides Ac3H11_205 and Ac3H11_206 are separated by 99 nucleotides Ac3H11_206 and Ac3H11_207 are separated by 216 nucleotides
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Ac3H11_205 - FIG152265: Sodium:solute symporter associated protein, at 16,234 to 16,533
_205
Ac3H11_206 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 16,633 to 19,023
_206
Ac3H11_207 - FIG137360: hypothetical protein, at 19,240 to 20,109
_207
Position (kb) 16
17
18
19
20 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 15.650 kb on + strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.697 kb on + strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.910 kb on + strand, within Ac3H11_204 at 15.911 kb on - strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.013 kb on - strand, within Ac3H11_204 at 16.040 kb on - strand at 16.040 kb on - strand at 16.040 kb on - strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.199 kb on - strand at 16.199 kb on - strand at 16.328 kb on + strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.383 kb on - strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.989 kb on + strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.172 kb on - strand, within Ac3H11_206 at 17.222 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.321 kb on - strand, within Ac3H11_206 at 17.345 kb on + strand, within Ac3H11_206 at 17.346 kb on - strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.718 kb on + strand, within Ac3H11_206 at 17.718 kb on + strand, within Ac3H11_206 at 17.961 kb on - strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.077 kb on + strand, within Ac3H11_206 at 18.078 kb on - strand, within Ac3H11_206 at 18.078 kb on - strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.350 kb on + strand, within Ac3H11_206 at 18.521 kb on + strand, within Ac3H11_206 at 18.521 kb on + strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.840 kb on - strand at 18.942 kb on + strand at 18.943 kb on - strand at 18.989 kb on - strand at 19.122 kb on + strand at 19.122 kb on + strand at 19.123 kb on - strand at 19.123 kb on - strand at 19.123 kb on - strand at 19.153 kb on + strand at 19.153 kb on + strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.168 kb on + strand at 19.169 kb on - strand at 19.169 kb on - strand at 19.304 kb on + strand at 19.304 kb on + strand at 19.305 kb on - strand at 19.651 kb on + strand, within Ac3H11_207 at 19.651 kb on + strand, within Ac3H11_207 at 19.652 kb on - strand, within Ac3H11_207 at 19.780 kb on + strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.817 kb on - strand, within Ac3H11_207 at 19.954 kb on + strand, within Ac3H11_207
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 15,650 + Ac3H11_204 0.72 +2.0 15,651 - Ac3H11_204 0.72 +2.1 15,651 - Ac3H11_204 0.72 -2.3 15,679 + Ac3H11_204 0.73 +0.1 15,679 + Ac3H11_204 0.73 +0.3 15,679 + Ac3H11_204 0.73 -1.7 15,679 + Ac3H11_204 0.73 +1.3 15,679 + Ac3H11_204 0.73 +2.3 15,680 - Ac3H11_204 0.73 +1.6 15,680 - Ac3H11_204 0.73 +1.0 15,680 - Ac3H11_204 0.73 +0.5 15,697 + Ac3H11_204 0.74 +1.4 15,698 - Ac3H11_204 0.74 -0.3 15,698 - Ac3H11_204 0.74 -0.0 15,698 - Ac3H11_204 0.74 +0.9 15,698 - Ac3H11_204 0.74 -0.5 15,698 - Ac3H11_204 0.74 +1.0 15,787 + Ac3H11_204 0.78 +2.0 15,787 + Ac3H11_204 0.78 -0.7 15,787 + Ac3H11_204 0.78 +1.8 15,788 - Ac3H11_204 0.78 +0.0 15,788 - Ac3H11_204 0.78 +1.6 15,788 - Ac3H11_204 0.78 -3.4 15,788 - Ac3H11_204 0.78 +1.1 15,788 - Ac3H11_204 0.78 -3.3 15,788 - Ac3H11_204 0.78 -0.7 15,862 + Ac3H11_204 0.82 +0.7 15,862 + Ac3H11_204 0.82 -1.9 15,863 - Ac3H11_204 0.82 -1.2 15,863 - Ac3H11_204 0.82 -1.7 15,910 + Ac3H11_204 0.84 +0.9 15,911 - Ac3H11_204 0.84 +0.4 15,979 + Ac3H11_204 0.87 -0.6 15,979 + Ac3H11_204 0.87 -1.3 15,979 + +0.5 15,979 + Ac3H11_204 0.87 +0.5 15,979 + Ac3H11_204 0.87 -2.4 15,979 + Ac3H11_204 0.87 +0.7 15,979 + Ac3H11_204 0.87 +0.2 15,979 + Ac3H11_204 0.87 -1.7 15,979 + Ac3H11_204 0.87 +1.1 15,980 - Ac3H11_204 0.88 +2.7 15,980 - Ac3H11_204 0.88 -0.2 15,980 - Ac3H11_204 0.88 +0.9 15,980 - Ac3H11_204 0.88 -0.4 15,980 - Ac3H11_204 0.88 +2.0 15,980 - Ac3H11_204 0.88 +0.1 15,980 - Ac3H11_204 0.88 -1.5 16,009 + Ac3H11_204 0.89 -0.6 16,009 + Ac3H11_204 0.89 -1.1 16,009 + Ac3H11_204 0.89 +0.7 16,009 + Ac3H11_204 0.89 +1.2 16,009 + Ac3H11_204 0.89 -2.4 16,009 + Ac3H11_204 0.89 -1.6 16,010 - Ac3H11_204 0.89 +0.1 16,010 - Ac3H11_204 0.89 +0.2 16,010 - Ac3H11_204 0.89 -3.5 16,010 - Ac3H11_204 0.89 -2.0 16,010 - Ac3H11_204 0.89 +1.7 16,010 - Ac3H11_204 0.89 +0.2 16,010 - Ac3H11_204 0.89 -2.0 16,010 - Ac3H11_204 0.89 -2.5 16,010 - Ac3H11_204 0.89 -0.9 16,010 - Ac3H11_204 0.89 -3.0 16,012 + Ac3H11_204 0.89 -1.3 16,012 + Ac3H11_204 0.89 +0.8 16,012 + Ac3H11_204 0.89 +0.9 16,012 + Ac3H11_204 0.89 -1.3 16,013 - Ac3H11_204 0.89 -1.1 16,040 - -2.7 16,040 - -0.1 16,040 - -1.3 16,165 + +0.3 16,165 + -2.1 16,165 + -0.7 16,165 + -0.6 16,165 + +0.9 16,165 + +0.8 16,165 + +1.0 16,166 - +0.8 16,166 - +2.1 16,166 - -0.9 16,166 - -0.9 16,166 - -3.2 16,166 - +0.1 16,199 - -0.8 16,199 - -0.6 16,328 + Ac3H11_205 0.31 -0.9 16,329 - Ac3H11_205 0.32 -0.3 16,329 - Ac3H11_205 0.32 +1.7 16,383 - Ac3H11_205 0.50 -0.3 16,433 + Ac3H11_205 0.66 +1.1 16,433 + Ac3H11_205 0.66 -1.4 16,433 + Ac3H11_205 0.66 +1.2 16,434 - Ac3H11_205 0.67 -2.1 16,434 - Ac3H11_205 0.67 +1.3 16,434 - Ac3H11_205 0.67 +1.3 16,434 - Ac3H11_205 0.67 -0.5 16,434 - Ac3H11_205 0.67 +0.2 16,434 - Ac3H11_205 0.67 +1.4 16,763 + +1.7 16,763 + -1.0 16,763 + -3.3 16,763 + +0.7 16,763 + -0.5 16,763 + -0.1 16,763 + -0.5 16,764 - -0.7 16,764 - -2.0 16,764 - -1.4 16,989 + Ac3H11_206 0.15 -2.1 16,990 - Ac3H11_206 0.15 -1.0 16,990 - Ac3H11_206 0.15 -3.0 16,990 - Ac3H11_206 0.15 -2.7 16,990 - Ac3H11_206 0.15 -3.9 17,171 + Ac3H11_206 0.23 +0.3 17,171 + Ac3H11_206 0.23 +0.4 17,172 - Ac3H11_206 0.23 -2.1 17,222 + Ac3H11_206 0.25 -3.7 17,320 + Ac3H11_206 0.29 -1.5 17,320 + Ac3H11_206 0.29 -0.5 17,320 + Ac3H11_206 0.29 -0.5 17,320 + Ac3H11_206 0.29 -0.1 17,321 - Ac3H11_206 0.29 +0.5 17,345 + Ac3H11_206 0.30 -1.9 17,346 - Ac3H11_206 0.30 +0.7 17,621 + Ac3H11_206 0.41 -0.1 17,621 + Ac3H11_206 0.41 +0.1 17,621 + Ac3H11_206 0.41 +0.3 17,622 - Ac3H11_206 0.41 -0.5 17,622 - Ac3H11_206 0.41 -0.4 17,622 - Ac3H11_206 0.41 +0.2 17,622 - Ac3H11_206 0.41 -0.5 17,622 - Ac3H11_206 0.41 -1.6 17,622 - Ac3H11_206 0.41 +0.3 17,718 + Ac3H11_206 0.45 +0.5 17,718 + Ac3H11_206 0.45 -2.5 17,961 - Ac3H11_206 0.56 -2.7 18,023 + Ac3H11_206 0.58 -3.7 18,023 + Ac3H11_206 0.58 -1.5 18,023 + Ac3H11_206 0.58 -1.8 18,023 + Ac3H11_206 0.58 +0.2 18,023 + Ac3H11_206 0.58 -2.6 18,023 + Ac3H11_206 0.58 -1.7 18,024 - Ac3H11_206 0.58 -1.0 18,024 - Ac3H11_206 0.58 +0.1 18,024 - Ac3H11_206 0.58 +1.7 18,024 - Ac3H11_206 0.58 -1.3 18,024 - Ac3H11_206 0.58 -2.5 18,024 - Ac3H11_206 0.58 -3.3 18,077 + Ac3H11_206 0.60 -0.6 18,078 - Ac3H11_206 0.60 -0.5 18,078 - Ac3H11_206 0.60 -1.4 18,299 + Ac3H11_206 0.70 -2.5 18,299 + Ac3H11_206 0.70 +0.7 18,299 + Ac3H11_206 0.70 +0.6 18,299 + Ac3H11_206 0.70 -2.1 18,299 + Ac3H11_206 0.70 -2.6 18,299 + Ac3H11_206 0.70 -2.2 18,299 + Ac3H11_206 0.70 -2.4 18,299 + Ac3H11_206 0.70 +0.2 18,299 + Ac3H11_206 0.70 +0.1 18,299 + Ac3H11_206 0.70 -2.7 18,299 + Ac3H11_206 0.70 +0.6 18,300 - Ac3H11_206 0.70 -3.6 18,300 - Ac3H11_206 0.70 -2.1 18,300 - Ac3H11_206 0.70 -0.2 18,300 - Ac3H11_206 0.70 +0.4 18,300 - Ac3H11_206 0.70 -0.5 18,300 - Ac3H11_206 0.70 +0.2 18,300 - Ac3H11_206 0.70 -2.2 18,300 - Ac3H11_206 0.70 -1.1 18,350 + Ac3H11_206 0.72 +1.0 18,521 + Ac3H11_206 0.79 +0.4 18,521 + Ac3H11_206 0.79 -1.5 18,522 - Ac3H11_206 0.79 +0.2 18,522 - Ac3H11_206 0.79 -3.2 18,522 - Ac3H11_206 0.79 -3.3 18,840 - +0.5 18,942 + -2.2 18,943 - +0.1 18,989 - +0.5 19,122 + -2.4 19,122 + -2.5 19,123 - -1.0 19,123 - +1.9 19,123 - -0.5 19,153 + -1.6 19,153 + -2.8 19,154 - -2.0 19,154 - -0.6 19,154 - -3.3 19,154 - -1.3 19,168 + -2.8 19,169 - +0.1 19,169 - -0.7 19,304 + +0.6 19,304 + -1.5 19,305 - -2.3 19,651 + Ac3H11_207 0.47 +0.2 19,651 + Ac3H11_207 0.47 +0.3 19,652 - Ac3H11_207 0.47 -0.8 19,780 + Ac3H11_207 0.62 -1.6 19,781 - Ac3H11_207 0.62 -2.7 19,781 - Ac3H11_207 0.62 -0.9 19,781 - Ac3H11_207 0.62 -1.6 19,816 + Ac3H11_207 0.66 -0.7 19,816 + Ac3H11_207 0.66 -1.5 19,816 + Ac3H11_207 0.66 -4.1 19,816 + Ac3H11_207 0.66 -3.2 19,817 - Ac3H11_207 0.66 -0.4 19,954 + Ac3H11_207 0.82 -2.7
Or see this region's nucleotide sequence