Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_200 and Ac3H11_201 are separated by 192 nucleotides Ac3H11_201 and Ac3H11_202 are separated by 128 nucleotides Ac3H11_202 and Ac3H11_203 are separated by 126 nucleotides Ac3H11_203 and Ac3H11_204 are separated by 150 nucleotides
Ac3H11_200 - Transcriptional regulator, at 11,443 to 12,357
_200
Ac3H11_201 - FIG00349048: hypothetical protein, at 12,550 to 12,858
_201
Ac3H11_202 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 12,987 to 13,346
_202
Ac3H11_203 - Probable proline-rich protein, at 13,473 to 13,991
_203
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Position (kb) 12
13
14 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.391 kb on + strand at 12.468 kb on + strand at 12.469 kb on - strand at 12.470 kb on + strand at 12.470 kb on + strand at 12.470 kb on + strand at 12.907 kb on + strand at 12.915 kb on + strand at 12.916 kb on - strand at 12.916 kb on - strand at 12.919 kb on + strand at 12.920 kb on - strand at 12.920 kb on - strand at 12.920 kb on - strand at 12.948 kb on - strand at 12.955 kb on - strand at 13.020 kb on + strand at 13.083 kb on + strand, within Ac3H11_202 at 13.083 kb on + strand, within Ac3H11_202 at 13.084 kb on - strand, within Ac3H11_202 at 13.084 kb on - strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.642 kb on + strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 14.001 kb on - strand at 14.001 kb on - strand at 14.001 kb on - strand at 14.011 kb on + strand at 14.012 kb on - strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.024 kb on - strand at 14.024 kb on - strand at 14.063 kb on + strand at 14.091 kb on - strand at 14.106 kb on + strand at 14.106 kb on + strand at 14.107 kb on - strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.117 kb on - strand at 14.143 kb on + strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 12,320 - -2.3 12,320 - +0.3 12,320 - -1.3 12,320 - -1.0 12,320 - -0.3 12,391 + +0.4 12,468 + -1.2 12,469 - -2.7 12,470 + +1.1 12,470 + +1.6 12,470 + -3.9 12,907 + +1.7 12,915 + +0.9 12,916 - +0.3 12,916 - -0.1 12,919 + +0.6 12,920 - +0.1 12,920 - -1.3 12,920 - -0.4 12,948 - -0.4 12,955 - -0.1 13,020 + +1.0 13,083 + Ac3H11_202 0.27 -0.8 13,083 + Ac3H11_202 0.27 -2.6 13,084 - Ac3H11_202 0.27 +0.9 13,084 - Ac3H11_202 0.27 +0.5 13,098 + Ac3H11_202 0.31 -2.7 13,098 + Ac3H11_202 0.31 -1.9 13,098 + Ac3H11_202 0.31 -0.3 13,098 + Ac3H11_202 0.31 +0.5 13,098 + Ac3H11_202 0.31 +0.5 13,642 + Ac3H11_203 0.33 +0.3 13,643 - Ac3H11_203 0.33 -1.2 13,643 - Ac3H11_203 0.33 +2.0 14,001 - +0.4 14,001 - +0.2 14,001 - +1.3 14,011 + +0.3 14,012 - -1.2 14,023 + +0.3 14,023 + +1.5 14,023 + -1.3 14,024 - -2.4 14,024 - +1.1 14,063 + -2.7 14,091 - +0.2 14,106 + -1.5 14,106 + +1.1 14,107 - +1.0 14,112 + -1.9 14,112 + +2.6 14,112 + +1.2 14,112 + +0.7 14,112 + -1.1 14,112 + -0.4 14,112 + +0.3 14,112 + +0.2 14,113 - -1.9 14,113 - -1.3 14,113 - +1.0 14,113 - +0.2 14,113 - -0.7 14,113 - +0.5 14,116 + -0.8 14,116 + +0.9 14,116 + +1.5 14,116 + +1.1 14,117 - -1.6 14,143 + +0.1 14,144 - +1.3 14,144 - +0.3 14,144 - +1.4 14,332 + +1.0 14,332 + +1.2 14,332 + -1.9 14,332 + -1.8 14,332 + +0.1 14,332 + +0.7 14,332 + +0.2 14,332 + -0.1 14,332 + -1.9 14,332 + -2.3 14,332 + -1.6 14,332 + +0.2 14,332 + +0.6 14,332 + -1.6 14,332 + -1.9 14,333 - +1.5 14,333 - +0.8 14,333 - -0.8 14,333 - +3.0 14,333 - -2.5 14,333 - -0.3 14,333 - +0.1 14,333 - -2.1 14,333 - -2.9 14,333 - +0.1 14,333 - +0.1 14,333 - +1.7 14,333 - -2.3 14,333 - +0.6 14,333 - +0.3 14,333 - +0.5 14,333 - -2.1 14,335 + -3.0 14,335 + -0.4 14,335 + -2.4 14,335 + +1.0 14,335 + +0.6 14,335 + -1.3 14,335 + -1.5 14,336 - -2.6 14,336 - -0.4 14,336 - -0.7
Or see this region's nucleotide sequence