Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1230 and Ac3H11_1231 are separated by 68 nucleotides Ac3H11_1231 and Ac3H11_1232 are separated by 80 nucleotides Ac3H11_1232 and Ac3H11_1233 are separated by 181 nucleotides Ac3H11_1233 and Ac3H11_1234 are separated by 127 nucleotides
Ac3H11_1230 - Transcriptional regulator, TetR family, at 48,069 to 48,785
_1230
Ac3H11_1231 - Glutathione S-transferase family protein, at 48,854 to 49,468
_1231
Ac3H11_1232 - Adenylosuccinate lyase (EC 4.3.2.2), at 49,549 to 50,967
_1232
Ac3H11_1233 - YaeQ protein, at 51,149 to 51,709
_1233
Ac3H11_1234 - FIG00932085: hypothetical protein, at 51,837 to 52,142
_1234
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.799 kb on + strand at 48.800 kb on - strand at 48.800 kb on - strand at 48.868 kb on + strand at 48.869 kb on - strand at 49.023 kb on + strand, within Ac3H11_1231 at 49.023 kb on + strand, within Ac3H11_1231 at 49.023 kb on + strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.264 kb on - strand, within Ac3H11_1231 at 49.392 kb on + strand, within Ac3H11_1231 at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.437 kb on + strand at 49.437 kb on + strand at 49.437 kb on + strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.492 kb on + strand at 49.493 kb on - strand at 49.518 kb on + strand at 49.561 kb on + strand at 49.561 kb on + strand at 49.561 kb on + strand at 49.562 kb on - strand at 49.574 kb on + strand at 49.574 kb on + strand at 51.065 kb on + strand at 51.066 kb on - strand at 51.066 kb on - strand at 51.066 kb on - strand at 51.087 kb on - strand at 51.087 kb on - strand at 51.087 kb on - strand at 51.126 kb on + strand at 51.130 kb on + strand at 51.131 kb on - strand at 51.137 kb on + strand at 51.138 kb on - strand at 51.209 kb on + strand, within Ac3H11_1233 at 51.209 kb on + strand, within Ac3H11_1233 at 51.210 kb on - strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.213 kb on - strand, within Ac3H11_1233 at 51.213 kb on - strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.275 kb on - strand, within Ac3H11_1233 at 51.275 kb on - strand, within Ac3H11_1233 at 51.488 kb on + strand, within Ac3H11_1233 at 51.707 kb on + strand at 51.707 kb on + strand at 51.708 kb on - strand at 51.779 kb on + strand at 51.833 kb on - strand at 51.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0025 mg/ml remove 48,550 + Ac3H11_1230 0.67 -1.9 48,550 + Ac3H11_1230 0.67 +0.2 48,550 + Ac3H11_1230 0.67 -1.3 48,550 + Ac3H11_1230 0.67 -1.1 48,551 - Ac3H11_1230 0.67 +1.3 48,551 - Ac3H11_1230 0.67 +0.8 48,551 - Ac3H11_1230 0.67 -0.2 48,551 - Ac3H11_1230 0.67 -0.4 48,551 - Ac3H11_1230 0.67 -2.3 48,551 - Ac3H11_1230 0.67 -2.0 48,551 - Ac3H11_1230 0.67 +2.2 48,551 - Ac3H11_1230 0.67 +0.3 48,799 + +2.1 48,800 - -3.8 48,800 - -0.9 48,868 + +3.3 48,869 - -1.5 49,023 + Ac3H11_1231 0.27 -0.2 49,023 + Ac3H11_1231 0.27 +1.0 49,023 + Ac3H11_1231 0.27 -0.9 49,024 - Ac3H11_1231 0.28 -0.4 49,024 - Ac3H11_1231 0.28 +0.7 49,024 - Ac3H11_1231 0.28 +0.3 49,264 - Ac3H11_1231 0.67 -0.6 49,392 + Ac3H11_1231 0.87 +0.4 49,420 + -0.8 49,420 + +1.0 49,420 + +0.8 49,420 + +1.0 49,420 + -1.2 49,420 + -0.9 49,420 + -1.3 49,420 + -1.1 49,420 + -3.1 49,421 - -0.8 49,421 - -2.4 49,421 - +1.3 49,421 - -0.1 49,421 - +1.3 49,421 - -1.2 49,424 + +0.1 49,424 + -2.4 49,424 + -2.5 49,424 + -0.3 49,424 + +0.5 49,424 + -1.1 49,424 + +1.0 49,425 - +1.5 49,425 - +1.8 49,425 - -1.3 49,425 - +0.8 49,425 - -2.5 49,425 - +0.3 49,425 - +1.2 49,425 - +0.8 49,425 - -2.0 49,425 - -1.6 49,437 + -0.1 49,437 + +0.3 49,437 + -0.7 49,438 - +1.2 49,438 - +2.7 49,438 - -2.7 49,438 - +0.1 49,492 + -0.1 49,493 - +0.0 49,518 + -0.3 49,561 + -2.3 49,561 + -1.3 49,561 + -0.3 49,562 - +0.6 49,574 + +0.8 49,574 + +0.5 51,065 + -1.1 51,066 - +2.3 51,066 - +0.4 51,066 - -2.5 51,087 - +1.1 51,087 - -0.1 51,087 - -1.0 51,126 + -0.7 51,130 + +3.1 51,131 - -0.8 51,137 + +0.2 51,138 - -0.1 51,209 + Ac3H11_1233 0.11 +0.3 51,209 + Ac3H11_1233 0.11 -1.9 51,210 - Ac3H11_1233 0.11 -1.8 51,212 + Ac3H11_1233 0.11 +2.3 51,212 + Ac3H11_1233 0.11 +2.9 51,212 + Ac3H11_1233 0.11 -0.7 51,213 - Ac3H11_1233 0.11 -2.3 51,213 - Ac3H11_1233 0.11 +0.8 51,274 + Ac3H11_1233 0.22 +0.5 51,274 + Ac3H11_1233 0.22 +2.9 51,274 + Ac3H11_1233 0.22 -0.4 51,274 + Ac3H11_1233 0.22 +1.4 51,275 - Ac3H11_1233 0.22 -2.7 51,275 - Ac3H11_1233 0.22 +1.9 51,488 + Ac3H11_1233 0.60 -2.2 51,707 + -0.7 51,707 + -2.2 51,708 - +0.6 51,779 + -1.3 51,833 - +3.1 51,833 - +0.6
Or see this region's nucleotide sequence