Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25580 and AZOBR_RS25585 overlap by 7 nucleotides AZOBR_RS25585 and AZOBR_RS25590 are separated by 4 nucleotides AZOBR_RS25590 and AZOBR_RS25595 are separated by 4 nucleotides
AZOBR_RS25580: AZOBR_RS25580 - ABC transporter substrate-binding protein, at 787,597 to 788,880
_RS25580
AZOBR_RS25585: AZOBR_RS25585 - ABC transporter permease, at 788,874 to 789,779
_RS25585
AZOBR_RS25590: AZOBR_RS25590 - sugar ABC transporter permease, at 789,784 to 790,617
_RS25590
AZOBR_RS25595: AZOBR_RS25595 - sugar ABC transporter ATP-binding protein, at 790,622 to 791,698
_RS25595
Position (kb) 788
789
790 Strain fitness (log2 ratio) -1
0
1
2 at 787.900 kb on + strand, within AZOBR_RS25580 at 787.900 kb on + strand, within AZOBR_RS25580 at 787.900 kb on + strand, within AZOBR_RS25580 at 787.901 kb on - strand, within AZOBR_RS25580 at 787.901 kb on - strand, within AZOBR_RS25580 at 787.901 kb on - strand, within AZOBR_RS25580 at 787.901 kb on - strand, within AZOBR_RS25580 at 788.029 kb on + strand, within AZOBR_RS25580 at 788.030 kb on - strand, within AZOBR_RS25580 at 788.030 kb on - strand, within AZOBR_RS25580 at 788.155 kb on + strand, within AZOBR_RS25580 at 788.156 kb on - strand, within AZOBR_RS25580 at 788.177 kb on - strand, within AZOBR_RS25580 at 788.341 kb on + strand, within AZOBR_RS25580 at 788.341 kb on + strand, within AZOBR_RS25580 at 788.342 kb on - strand, within AZOBR_RS25580 at 788.342 kb on - strand, within AZOBR_RS25580 at 788.342 kb on - strand, within AZOBR_RS25580 at 788.342 kb on - strand, within AZOBR_RS25580 at 788.342 kb on - strand, within AZOBR_RS25580 at 788.578 kb on + strand, within AZOBR_RS25580 at 788.753 kb on - strand at 788.753 kb on - strand at 788.776 kb on + strand at 788.776 kb on + strand at 788.777 kb on - strand at 788.856 kb on + strand at 789.063 kb on + strand, within AZOBR_RS25585 at 789.063 kb on + strand, within AZOBR_RS25585 at 789.063 kb on + strand, within AZOBR_RS25585 at 789.063 kb on + strand, within AZOBR_RS25585 at 789.064 kb on - strand, within AZOBR_RS25585 at 789.064 kb on - strand, within AZOBR_RS25585 at 789.064 kb on - strand, within AZOBR_RS25585 at 789.463 kb on - strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.597 kb on + strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.598 kb on - strand, within AZOBR_RS25585 at 789.643 kb on - strand, within AZOBR_RS25585 at 789.654 kb on + strand, within AZOBR_RS25585 at 789.655 kb on - strand, within AZOBR_RS25585 at 789.734 kb on - strand at 789.813 kb on - strand at 789.949 kb on + strand, within AZOBR_RS25590 at 789.949 kb on + strand, within AZOBR_RS25590 at 789.950 kb on - strand, within AZOBR_RS25590 at 789.950 kb on - strand, within AZOBR_RS25590 at 789.950 kb on - strand, within AZOBR_RS25590 at 789.950 kb on - strand, within AZOBR_RS25590 at 790.184 kb on - strand, within AZOBR_RS25590 at 790.213 kb on + strand, within AZOBR_RS25590 at 790.214 kb on - strand, within AZOBR_RS25590 at 790.214 kb on - strand, within AZOBR_RS25590
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 787,900 + AZOBR_RS25580 0.24 +0.2 787,900 + AZOBR_RS25580 0.24 -1.1 787,900 + AZOBR_RS25580 0.24 -1.2 787,901 - AZOBR_RS25580 0.24 -0.4 787,901 - AZOBR_RS25580 0.24 -1.0 787,901 - AZOBR_RS25580 0.24 +1.3 787,901 - AZOBR_RS25580 0.24 -0.3 788,029 + AZOBR_RS25580 0.34 +1.2 788,030 - AZOBR_RS25580 0.34 +0.5 788,030 - AZOBR_RS25580 0.34 +0.3 788,155 + AZOBR_RS25580 0.43 +0.1 788,156 - AZOBR_RS25580 0.44 -0.7 788,177 - AZOBR_RS25580 0.45 -0.7 788,341 + AZOBR_RS25580 0.58 -0.5 788,341 + AZOBR_RS25580 0.58 +0.2 788,342 - AZOBR_RS25580 0.58 +2.4 788,342 - AZOBR_RS25580 0.58 -0.2 788,342 - AZOBR_RS25580 0.58 +0.2 788,342 - AZOBR_RS25580 0.58 +0.3 788,342 - AZOBR_RS25580 0.58 +0.3 788,578 + AZOBR_RS25580 0.76 -0.1 788,753 - -0.3 788,753 - +0.8 788,776 + -0.2 788,776 + +0.0 788,777 - -1.2 788,856 + +0.7 789,063 + AZOBR_RS25585 0.21 -0.3 789,063 + AZOBR_RS25585 0.21 +1.0 789,063 + AZOBR_RS25585 0.21 +0.3 789,063 + AZOBR_RS25585 0.21 -0.5 789,064 - AZOBR_RS25585 0.21 +1.2 789,064 - AZOBR_RS25585 0.21 +0.1 789,064 - AZOBR_RS25585 0.21 +0.6 789,463 - AZOBR_RS25585 0.65 +0.3 789,597 + AZOBR_RS25585 0.80 +0.7 789,597 + AZOBR_RS25585 0.80 +0.1 789,597 + AZOBR_RS25585 0.80 -0.7 789,597 + AZOBR_RS25585 0.80 +0.3 789,597 + AZOBR_RS25585 0.80 -0.2 789,597 + AZOBR_RS25585 0.80 -0.8 789,597 + AZOBR_RS25585 0.80 +0.6 789,598 - AZOBR_RS25585 0.80 -0.4 789,598 - AZOBR_RS25585 0.80 +0.2 789,598 - AZOBR_RS25585 0.80 +0.4 789,598 - AZOBR_RS25585 0.80 +0.8 789,598 - AZOBR_RS25585 0.80 -1.2 789,598 - AZOBR_RS25585 0.80 +1.0 789,598 - AZOBR_RS25585 0.80 +0.8 789,598 - AZOBR_RS25585 0.80 +0.4 789,598 - AZOBR_RS25585 0.80 -0.3 789,598 - AZOBR_RS25585 0.80 +0.2 789,643 - AZOBR_RS25585 0.85 +0.0 789,654 + AZOBR_RS25585 0.86 -0.1 789,655 - AZOBR_RS25585 0.86 +0.1 789,734 - -0.2 789,813 - +1.5 789,949 + AZOBR_RS25590 0.20 +0.2 789,949 + AZOBR_RS25590 0.20 +0.3 789,950 - AZOBR_RS25590 0.20 +0.1 789,950 - AZOBR_RS25590 0.20 -0.1 789,950 - AZOBR_RS25590 0.20 -0.1 789,950 - AZOBR_RS25590 0.20 -1.5 790,184 - AZOBR_RS25590 0.48 +0.7 790,213 + AZOBR_RS25590 0.51 -0.1 790,214 - AZOBR_RS25590 0.52 +0.3 790,214 - AZOBR_RS25590 0.52 +1.8
Or see this region's nucleotide sequence